Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 WIZP1-201ENST00000531444 2299 ntBASIC18.48■□□□□ 0.55
LINGO3P0C6S8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 AC008894.3-201ENST00000624324 3103 ntBASIC18.48■□□□□ 0.55
LINGO3P0C6S8 DPP3P2-201ENST00000416030 1696 ntBASIC18.48■□□□□ 0.55
LINGO3P0C6S8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.48■□□□□ 0.55
LINGO3P0C6S8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINGO3P0C6S8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 KRT17P1-201ENST00000399211 1546 ntBASIC18.46■□□□□ 0.55
LINGO3P0C6S8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 MIPEPP3-201ENST00000412105 444 ntBASIC18.46■□□□□ 0.55
LINGO3P0C6S8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 AL109923.1-201ENST00000618799 583 ntBASIC18.46■□□□□ 0.55
LINGO3P0C6S8 AC105020.6-201ENST00000621523 1217 ntBASIC18.46■□□□□ 0.55
LINGO3P0C6S8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINGO3P0C6S8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms