Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSDP07339 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSDP07339 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CTSDP07339 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.91■□□□□ 0.14
CTSDP07339 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CTSDP07339 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.9■□□□□ 0.14
CTSDP07339 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.9■□□□□ 0.14
CTSDP07339 CNN2P6-201ENST00000439038 900 ntBASIC15.9■□□□□ 0.14
CTSDP07339 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.9■□□□□ 0.14
CTSDP07339 NTF6G-201ENST00000591094 616 ntBASIC15.9■□□□□ 0.14
CTSDP07339 AC008694.1-202ENST00000636953 945 ntBASIC15.9■□□□□ 0.14
CTSDP07339 AC083906.6-201ENST00000641366 219 ntBASIC15.9■□□□□ 0.14
CTSDP07339 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 FEM1AP3-201ENST00000403722 1741 ntBASIC15.9■□□□□ 0.14
CTSDP07339 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CTSDP07339 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CTSDP07339 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
CTSDP07339 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTSDP07339 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 ABALON-201ENST00000629058 1903 ntBASIC15.9■□□□□ 0.14
CTSDP07339 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CTSDP07339 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.89■□□□□ 0.13
CTSDP07339 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CTSDP07339 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CTSDP07339 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CTSDP07339 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.89■□□□□ 0.13
CTSDP07339 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.89■□□□□ 0.13
CTSDP07339 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.89■□□□□ 0.13
CTSDP07339 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.89■□□□□ 0.13
CTSDP07339 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTSDP07339 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.89■□□□□ 0.13
CTSDP07339 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.88■□□□□ 0.13
CTSDP07339 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.88■□□□□ 0.13
CTSDP07339 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CTSDP07339 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms