Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GYPBP06028 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GYPBP06028 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GYPBP06028 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GYPBP06028 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GYPBP06028 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.21■□□□□ 0.34
GYPBP06028 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
GYPBP06028 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GYPBP06028 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.2■□□□□ 0.34
GYPBP06028 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.2■□□□□ 0.34
GYPBP06028 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.2■□□□□ 0.34
GYPBP06028 MIR935-201ENST00000401179 91 ntBASIC17.2■□□□□ 0.34
GYPBP06028 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.2■□□□□ 0.34
GYPBP06028 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.2■□□□□ 0.34
GYPBP06028 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.2■□□□□ 0.34
GYPBP06028 AC097658.1-201ENST00000475555 843 ntBASIC17.2■□□□□ 0.34
GYPBP06028 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.2■□□□□ 0.34
GYPBP06028 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.2■□□□□ 0.34
GYPBP06028 AC098934.4-201ENST00000564127 592 ntBASIC17.2■□□□□ 0.34
GYPBP06028 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.2■□□□□ 0.34
GYPBP06028 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GYPBP06028 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 IRX1P1-201ENST00000438849 1838 ntBASIC17.19■□□□□ 0.34
GYPBP06028 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
GYPBP06028 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.19■□□□□ 0.34
GYPBP06028 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.19■□□□□ 0.34
GYPBP06028 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.19■□□□□ 0.34
GYPBP06028 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 NCF1B-203ENST00000435988 1254 ntBASIC17.19■□□□□ 0.34
GYPBP06028 PNMA6B-201ENST00000538162 1200 ntBASIC17.19■□□□□ 0.34
GYPBP06028 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.19■□□□□ 0.34
GYPBP06028 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.19■□□□□ 0.34
GYPBP06028 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.19■□□□□ 0.34
GYPBP06028 MIR4758-201ENST00000577688 71 ntBASIC17.19■□□□□ 0.34
GYPBP06028 HLA-B-256ENST00000639848 1089 ntBASIC17.19■□□□□ 0.34
GYPBP06028 MYC-209ENST00000641252 345 ntBASIC17.19■□□□□ 0.34
GYPBP06028 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.19■□□□□ 0.34
GYPBP06028 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.19■□□□□ 0.34
GYPBP06028 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.19■□□□□ 0.34
GYPBP06028 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.19■□□□□ 0.34
GYPBP06028 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GYPBP06028 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 HCG11-201ENST00000411553 5696 ntBASIC17.18■□□□□ 0.34
GYPBP06028 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GYPBP06028 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.18■□□□□ 0.34
GYPBP06028 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
GYPBP06028 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.18■□□□□ 0.34
GYPBP06028 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.18■□□□□ 0.34
GYPBP06028 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GYPBP06028 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.18■□□□□ 0.34
GYPBP06028 WIZP1-201ENST00000531444 2299 ntBASIC17.18■□□□□ 0.34
GYPBP06028 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
GYPBP06028 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms