Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DQB2P05538 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 MESTP1-201ENST00000404287 994 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 AC004951.3-201ENST00000418645 1148 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 B3GAT3P1-201ENST00000471720 806 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 MIR6786-201ENST00000616843 113 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 AC011298.2-201ENST00000617989 482 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.44■□□□□ 0.7
HLA-DQB2P05538 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DQB2P05538 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
HLA-DQB2P05538 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 AP001412.1-201ENST00000608405 714 ntBASIC19.43■□□□□ 0.7
HLA-DQB2P05538 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DQB2P05538 KRT8P11-201ENST00000409686 1436 ntBASIC19.42■□□□□ 0.7
HLA-DQB2P05538 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 BX323043.1-201ENST00000641006 1765 ntBASIC19.42■□□□□ 0.7
HLA-DQB2P05538 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 NUDT16P1-203ENST00000513809 620 ntBASIC19.42■□□□□ 0.7
HLA-DQB2P05538 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 FEM1AP3-201ENST00000403722 1741 ntBASIC19.42■□□□□ 0.7
HLA-DQB2P05538 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DQB2P05538 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DQB2P05538 MIR718-201ENST00000390190 70 ntBASIC19.41■□□□□ 0.7
HLA-DQB2P05538 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms