Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 AL158211.5-201ENST00000623583 2518 ntBASIC17.89■□□□□ 0.45
PDGFAP04085 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.89■□□□□ 0.45
PDGFAP04085 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 CCR12P-201ENST00000446203 998 ntBASIC17.89■□□□□ 0.45
PDGFAP04085 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 COX11P1-201ENST00000489116 835 ntBASIC17.89■□□□□ 0.45
PDGFAP04085 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 AC011558.1-201ENST00000623459 338 ntBASIC17.89■□□□□ 0.45
PDGFAP04085 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.89■□□□□ 0.45
PDGFAP04085 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.89■□□□□ 0.45
PDGFAP04085 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDGFAP04085 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.88■□□□□ 0.45
PDGFAP04085 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PDGFAP04085 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.88■□□□□ 0.45
PDGFAP04085 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.88■□□□□ 0.45
PDGFAP04085 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PDGFAP04085 SLC25A1P2-201ENST00000430693 912 ntBASIC17.88■□□□□ 0.45
PDGFAP04085 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
PDGFAP04085 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDGFAP04085 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
PDGFAP04085 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.88■□□□□ 0.45
PDGFAP04085 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.88■□□□□ 0.45
PDGFAP04085 AC141257.4-201ENST00000634557 245 ntBASIC17.88■□□□□ 0.45
PDGFAP04085 AC136944.6-201ENST00000634818 245 ntBASIC17.88■□□□□ 0.45
PDGFAP04085 AP000550.4-202ENST00000639755 178 ntBASIC17.88■□□□□ 0.45
PDGFAP04085 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PDGFAP04085 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDGFAP04085 AC092338.2-201ENST00000568827 1415 ntBASIC17.88■□□□□ 0.45
PDGFAP04085 AFG3L1P-217ENST00000557444 2447 ntBASIC17.88■□□□□ 0.45
PDGFAP04085 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFAP04085 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFAP04085 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFAP04085 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDGFAP04085 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFAP04085 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFAP04085 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFAP04085 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFAP04085 AC009947.2-201ENST00000444014 672 ntBASIC17.87■□□□□ 0.45
PDGFAP04085 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDGFAP04085 AC092647.4-201ENST00000457211 535 ntBASIC17.87■□□□□ 0.45
PDGFAP04085 Z85996.1-201ENST00000494644 937 ntBASIC17.87■□□□□ 0.45
PDGFAP04085 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.87■□□□□ 0.45
PDGFAP04085 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.87■□□□□ 0.45
PDGFAP04085 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
PDGFAP04085 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFAP04085 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDGFAP04085 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDGFAP04085 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.87■□□□□ 0.45
PDGFAP04085 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFAP04085 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PDGFAP04085 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.87■□□□□ 0.45
PDGFAP04085 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDGFAP04085 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 BX323043.1-201ENST00000641006 1765 ntBASIC17.86■□□□□ 0.45
PDGFAP04085 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PDGFAP04085 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFAP04085 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFAP04085 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFAP04085 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFAP04085 FAM86EP-206ENST00000510506 987 ntBASIC17.86■□□□□ 0.45
PDGFAP04085 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.86■□□□□ 0.45
PDGFAP04085 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDGFAP04085 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.86■□□□□ 0.45
PDGFAP04085 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFAP04085 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.86■□□□□ 0.45
PDGFAP04085 KRT126P-201ENST00000549467 1181 ntBASIC17.86■□□□□ 0.45
PDGFAP04085 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.86■□□□□ 0.45
PDGFAP04085 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.86■□□□□ 0.45
PDGFAP04085 AL023803.3-201ENST00000615559 522 ntBASIC17.86■□□□□ 0.45
PDGFAP04085 AC010653.2-201ENST00000623505 997 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms