Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.9■□□□□ 0.46
OPN1SWP03999 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
OPN1SWP03999 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
OPN1SWP03999 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
OPN1SWP03999 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
OPN1SWP03999 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.9■□□□□ 0.46
OPN1SWP03999 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
OPN1SWP03999 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OPN1SWP03999 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
OPN1SWP03999 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
OPN1SWP03999 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
OPN1SWP03999 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.89■□□□□ 0.45
OPN1SWP03999 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.89■□□□□ 0.45
OPN1SWP03999 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.89■□□□□ 0.45
OPN1SWP03999 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.89■□□□□ 0.45
OPN1SWP03999 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.89■□□□□ 0.45
OPN1SWP03999 TSPY6P-201ENST00000448518 926 ntBASIC17.89■□□□□ 0.45
OPN1SWP03999 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.89■□□□□ 0.45
OPN1SWP03999 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.89■□□□□ 0.45
OPN1SWP03999 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
OPN1SWP03999 AC098934.4-201ENST00000564127 592 ntBASIC17.89■□□□□ 0.45
OPN1SWP03999 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.89■□□□□ 0.45
OPN1SWP03999 WIZP1-201ENST00000531444 2299 ntBASIC17.89■□□□□ 0.45
OPN1SWP03999 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.89■□□□□ 0.45
OPN1SWP03999 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
OPN1SWP03999 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
OPN1SWP03999 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.88■□□□□ 0.45
OPN1SWP03999 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.88■□□□□ 0.45
OPN1SWP03999 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
OPN1SWP03999 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.88■□□□□ 0.45
OPN1SWP03999 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.88■□□□□ 0.45
OPN1SWP03999 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.88■□□□□ 0.45
OPN1SWP03999 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.88■□□□□ 0.45
OPN1SWP03999 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
OPN1SWP03999 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.88■□□□□ 0.45
OPN1SWP03999 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.88■□□□□ 0.45
OPN1SWP03999 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPN1SWP03999 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
OPN1SWP03999 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
OPN1SWP03999 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
OPN1SWP03999 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
OPN1SWP03999 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.87■□□□□ 0.45
OPN1SWP03999 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.87■□□□□ 0.45
OPN1SWP03999 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.87■□□□□ 0.45
OPN1SWP03999 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.87■□□□□ 0.45
OPN1SWP03999 AC097658.1-201ENST00000475555 843 ntBASIC17.87■□□□□ 0.45
OPN1SWP03999 PNMA6B-201ENST00000538162 1200 ntBASIC17.87■□□□□ 0.45
OPN1SWP03999 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.87■□□□□ 0.45
OPN1SWP03999 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.87■□□□□ 0.45
OPN1SWP03999 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.87■□□□□ 0.45
OPN1SWP03999 HLA-B-256ENST00000639848 1089 ntBASIC17.87■□□□□ 0.45
OPN1SWP03999 MYC-209ENST00000641252 345 ntBASIC17.87■□□□□ 0.45
OPN1SWP03999 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.87■□□□□ 0.45
OPN1SWP03999 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPN1SWP03999 HCG11-201ENST00000411553 5696 ntBASIC17.87■□□□□ 0.45
OPN1SWP03999 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms