Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
IFNA1P01562 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IFNA1P01562 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
IFNA1P01562 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.17■□□□□ 0.02
IFNA1P01562 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
IFNA1P01562 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
IFNA1P01562 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
IFNA1P01562 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.16■□□□□ 0.02
IFNA1P01562 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.16■□□□□ 0.02
IFNA1P01562 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNA1P01562 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNA1P01562 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
IFNA1P01562 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
IFNA1P01562 AC097381.1-201ENST00000429019 1296 ntBASIC15.16■□□□□ 0.02
IFNA1P01562 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNA1P01562 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.16■□□□□ 0.02
IFNA1P01562 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 AL356652.1-201ENST00000615962 565 ntBASIC15.16■□□□□ 0.02
IFNA1P01562 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNA1P01562 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNA1P01562 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
IFNA1P01562 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNA1P01562 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.15■□□□□ 0.02
IFNA1P01562 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 AL031963.3-201ENST00000606441 850 ntBASIC15.15■□□□□ 0.02
IFNA1P01562 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
IFNA1P01562 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
IFNA1P01562 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IFNA1P01562 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IFNA1P01562 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
IFNA1P01562 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNA1P01562 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNA1P01562 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNA1P01562 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
IFNA1P01562 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IFNA1P01562 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.14■□□□□ 0.01
IFNA1P01562 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IFNA1P01562 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNA1P01562 AC105265.2-201ENST00000467189 838 ntBASIC15.14■□□□□ 0.01
IFNA1P01562 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 AC138907.5-202ENST00000569484 235 ntBASIC15.14■□□□□ 0.01
IFNA1P01562 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
IFNA1P01562 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNA1P01562 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms