Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.63■■□□□ 1.05
SMC2O95347 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SMC2O95347 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.63■■□□□ 1.05
SMC2O95347 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SMC2O95347 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SMC2O95347 AL049812.1-201ENST00000432563 2267 ntBASIC21.63■■□□□ 1.05
SMC2O95347 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.63■■□□□ 1.05
SMC2O95347 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMC2O95347 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SMC2O95347 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SMC2O95347 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SMC2O95347 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.62■■□□□ 1.05
SMC2O95347 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.62■■□□□ 1.05
SMC2O95347 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.62■■□□□ 1.05
SMC2O95347 AL121829.2-201ENST00000620908 328 ntBASIC21.62■■□□□ 1.05
SMC2O95347 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.62■■□□□ 1.05
SMC2O95347 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMC2O95347 SDHAP1-207ENST00000440850 2000 ntBASIC21.62■■□□□ 1.05
SMC2O95347 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 AC104581.1-202ENST00000635932 2618 ntBASIC21.61■■□□□ 1.05
SMC2O95347 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SMC2O95347 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SMC2O95347 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.61■■□□□ 1.05
SMC2O95347 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 KRT18P16-201ENST00000510337 1294 ntBASIC21.61■■□□□ 1.05
SMC2O95347 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.61■■□□□ 1.05
SMC2O95347 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SMC2O95347 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMC2O95347 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC2O95347 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC2O95347 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
SMC2O95347 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
SMC2O95347 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.6■■□□□ 1.05
SMC2O95347 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC2O95347 AL138781.1-201ENST00000566567 1274 ntBASIC21.6■■□□□ 1.05
SMC2O95347 SOX15-203ENST00000570788 1093 ntBASIC21.6■■□□□ 1.05
SMC2O95347 AC083880.1-201ENST00000608266 535 ntBASIC21.6■■□□□ 1.05
SMC2O95347 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SMC2O95347 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.6■■□□□ 1.05
SMC2O95347 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMC2O95347 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SMC2O95347 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SMC2O95347 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
SMC2O95347 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SMC2O95347 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMC2O95347 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMC2O95347 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
SMC2O95347 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.59■■□□□ 1.05
SMC2O95347 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SMC2O95347 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SMC2O95347 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms