Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDM4BO94953 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDM4BO94953 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KDM4BO94953 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
KDM4BO94953 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KDM4BO94953 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
KDM4BO94953 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.8■□□□□ 0.28
KDM4BO94953 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 IKBKGP1-201ENST00000612193 1073 ntBASIC16.8■□□□□ 0.28
KDM4BO94953 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.8■□□□□ 0.28
KDM4BO94953 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KDM4BO94953 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.8■□□□□ 0.28
KDM4BO94953 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
KDM4BO94953 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.79■□□□□ 0.28
KDM4BO94953 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.79■□□□□ 0.28
KDM4BO94953 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.79■□□□□ 0.28
KDM4BO94953 AF201337.1-201ENST00000520239 748 ntBASIC16.79■□□□□ 0.28
KDM4BO94953 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 AL050303.2-201ENST00000619798 666 ntBASIC16.79■□□□□ 0.28
KDM4BO94953 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
KDM4BO94953 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 MKRN4P-201ENST00000444706 1521 ntBASIC16.79■□□□□ 0.28
KDM4BO94953 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.79■□□□□ 0.28
KDM4BO94953 AC009113.1-201ENST00000570267 2443 ntBASIC16.79■□□□□ 0.28
KDM4BO94953 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.79■□□□□ 0.28
KDM4BO94953 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
KDM4BO94953 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.79■□□□□ 0.28
KDM4BO94953 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KDM4BO94953 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KDM4BO94953 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDM4BO94953 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KDM4BO94953 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.78■□□□□ 0.28
KDM4BO94953 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.78■□□□□ 0.28
KDM4BO94953 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
KDM4BO94953 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 AC026185.1-201ENST00000445748 174 ntBASIC16.78■□□□□ 0.28
KDM4BO94953 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 AC105036.2-201ENST00000569468 176 ntBASIC16.78■□□□□ 0.28
KDM4BO94953 AL137784.2-201ENST00000607332 1000 ntBASIC16.78■□□□□ 0.28
KDM4BO94953 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.78■□□□□ 0.28
KDM4BO94953 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.78■□□□□ 0.28
KDM4BO94953 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KDM4BO94953 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms