Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.37■□□□□ 0.69
USP1O94782 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.37■□□□□ 0.69
USP1O94782 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
USP1O94782 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
USP1O94782 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.36■□□□□ 0.69
USP1O94782 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
USP1O94782 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
USP1O94782 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
USP1O94782 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
USP1O94782 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.36■□□□□ 0.69
USP1O94782 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.36■□□□□ 0.69
USP1O94782 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.36■□□□□ 0.69
USP1O94782 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP1O94782 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.36■□□□□ 0.69
USP1O94782 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
USP1O94782 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 AL138781.2-201ENST00000617896 1843 ntBASIC19.35■□□□□ 0.69
USP1O94782 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.35■□□□□ 0.69
USP1O94782 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
USP1O94782 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.35■□□□□ 0.69
USP1O94782 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.35■□□□□ 0.69
USP1O94782 PRKY-204ENST00000533551 1019 ntBASIC19.35■□□□□ 0.69
USP1O94782 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.35■□□□□ 0.69
USP1O94782 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 FP475955.4-201ENST00000623131 1990 ntBASIC19.35■□□□□ 0.69
USP1O94782 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
USP1O94782 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 IRX1P1-201ENST00000438849 1838 ntBASIC19.35■□□□□ 0.69
USP1O94782 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP1O94782 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.34■□□□□ 0.69
USP1O94782 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.34■□□□□ 0.69
USP1O94782 AC005332.8-201ENST00000622750 2735 ntBASIC19.34■□□□□ 0.69
USP1O94782 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 RNA5SP413-201ENST00000516373 109 ntBASIC19.34■□□□□ 0.69
USP1O94782 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.34■□□□□ 0.69
USP1O94782 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.34■□□□□ 0.69
USP1O94782 AC008403.3-201ENST00000598924 454 ntBASIC19.34■□□□□ 0.69
USP1O94782 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.34■□□□□ 0.69
USP1O94782 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.34■□□□□ 0.69
USP1O94782 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.34■□□□□ 0.69
USP1O94782 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.34■□□□□ 0.69
USP1O94782 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.34■□□□□ 0.69
USP1O94782 AIRN-201ENST00000601203 4374 ntBASIC19.34■□□□□ 0.69
USP1O94782 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP1O94782 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms