Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
CLPXO76031 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.37■□□□□ 0.37
CLPXO76031 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLPXO76031 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPXO76031 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
CLPXO76031 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.36■□□□□ 0.37
CLPXO76031 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
CLPXO76031 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CLPXO76031 AC141586.3-201ENST00000562166 1838 ntBASIC17.36■□□□□ 0.37
CLPXO76031 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPXO76031 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.36■□□□□ 0.37
CLPXO76031 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPXO76031 EEF1DP3-203ENST00000566025 782 ntBASIC17.36■□□□□ 0.37
CLPXO76031 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPXO76031 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.36■□□□□ 0.37
CLPXO76031 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLPXO76031 AL512353.2-201ENST00000448759 1962 ntBASIC17.36■□□□□ 0.37
CLPXO76031 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPXO76031 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.36■□□□□ 0.37
CLPXO76031 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPXO76031 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CLPXO76031 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLPXO76031 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPXO76031 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPXO76031 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLPXO76031 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.35■□□□□ 0.37
CLPXO76031 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.35■□□□□ 0.37
CLPXO76031 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.35■□□□□ 0.37
CLPXO76031 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 AC053503.5-201ENST00000601508 636 ntBASIC17.35■□□□□ 0.37
CLPXO76031 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLPXO76031 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPXO76031 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLPXO76031 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPXO76031 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPXO76031 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLPXO76031 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CLPXO76031 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPXO76031 LINC00896-202ENST00000609602 2128 ntBASIC17.35■□□□□ 0.37
CLPXO76031 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPXO76031 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.34■□□□□ 0.37
CLPXO76031 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
CLPXO76031 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLPXO76031 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLPXO76031 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLPXO76031 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPXO76031 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPXO76031 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.34■□□□□ 0.37
CLPXO76031 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.34■□□□□ 0.37
CLPXO76031 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.34■□□□□ 0.37
CLPXO76031 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPXO76031 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPXO76031 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLPXO76031 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms