Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ZNF253O75346 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF253O75346 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.9□□□□□ -0.02
ZNF253O75346 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.9□□□□□ -0.02
ZNF253O75346 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.9□□□□□ -0.02
ZNF253O75346 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.9□□□□□ -0.02
ZNF253O75346 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
ZNF253O75346 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
ZNF253O75346 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF253O75346 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.9□□□□□ -0.02
ZNF253O75346 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ZNF253O75346 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
ZNF253O75346 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.9□□□□□ -0.02
ZNF253O75346 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.9□□□□□ -0.02
ZNF253O75346 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 AC104581.1-202ENST00000635932 2618 ntBASIC14.89□□□□□ -0.03
ZNF253O75346 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
ZNF253O75346 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ZNF253O75346 AL512625.2-201ENST00000417533 625 ntBASIC14.89□□□□□ -0.03
ZNF253O75346 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.89□□□□□ -0.03
ZNF253O75346 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
ZNF253O75346 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ZNF253O75346 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF253O75346 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF253O75346 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ZNF253O75346 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF253O75346 AC006015.1-201ENST00000429970 570 ntBASIC14.88□□□□□ -0.03
ZNF253O75346 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF253O75346 AC011767.1-201ENST00000617410 1153 ntBASIC14.88□□□□□ -0.03
ZNF253O75346 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF253O75346 AC010980.2-201ENST00000587099 1412 ntBASIC14.88□□□□□ -0.03
ZNF253O75346 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ZNF253O75346 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.88□□□□□ -0.03
ZNF253O75346 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.88□□□□□ -0.03
ZNF253O75346 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ZNF253O75346 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF253O75346 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
ZNF253O75346 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZNF253O75346 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms