Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDH7O60245 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCDH7O60245 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH7O60245 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDH7O60245 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH7O60245 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH7O60245 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH7O60245 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDH7O60245 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH7O60245 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH7O60245 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH7O60245 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH7O60245 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDH7O60245 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH7O60245 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDH7O60245 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 FP475955.4-201ENST00000623131 1990 ntBASIC18.29■□□□□ 0.52
PCDH7O60245 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH7O60245 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH7O60245 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCDH7O60245 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDH7O60245 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH7O60245 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH7O60245 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCDH7O60245 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDH7O60245 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH7O60245 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH7O60245 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH7O60245 CD99P1-205ENST00000527459 561 ntBASIC18.28■□□□□ 0.52
PCDH7O60245 AL160286.2-201ENST00000567150 934 ntBASIC18.28■□□□□ 0.52
PCDH7O60245 AC006058.3-201ENST00000606217 1069 ntBASIC18.28■□□□□ 0.52
PCDH7O60245 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDH7O60245 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDH7O60245 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH7O60245 AC073648.6-201ENST00000641589 218 ntBASIC18.28■□□□□ 0.52
PCDH7O60245 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH7O60245 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDH7O60245 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
PCDH7O60245 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCDH7O60245 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH7O60245 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH7O60245 AC006333.2-201ENST00000607957 2099 ntBASIC18.27■□□□□ 0.52
PCDH7O60245 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH7O60245 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDH7O60245 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDH7O60245 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH7O60245 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDH7O60245 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH7O60245 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH7O60245 KRT16P5-201ENST00000455284 522 ntBASIC18.27■□□□□ 0.52
PCDH7O60245 AC124016.1-201ENST00000609552 612 ntBASIC18.27■□□□□ 0.52
PCDH7O60245 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCDH7O60245 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH7O60245 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDH7O60245 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDH7O60245 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH7O60245 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCDH7O60245 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH7O60245 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDH7O60245 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms