Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DUX1O43812 KRT8P45-201ENST00000414328 1447 ntBASIC18.36■□□□□ 0.53
DUX1O43812 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DUX1O43812 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX1O43812 SDHAP1-207ENST00000440850 2000 ntBASIC18.36■□□□□ 0.53
DUX1O43812 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.36■□□□□ 0.53
DUX1O43812 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX1O43812 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.36■□□□□ 0.53
DUX1O43812 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.36■□□□□ 0.53
DUX1O43812 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.36■□□□□ 0.53
DUX1O43812 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DUX1O43812 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.36■□□□□ 0.53
DUX1O43812 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.36■□□□□ 0.53
DUX1O43812 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.36■□□□□ 0.53
DUX1O43812 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.36■□□□□ 0.53
DUX1O43812 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.36■□□□□ 0.53
DUX1O43812 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.36■□□□□ 0.53
DUX1O43812 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DUX1O43812 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX1O43812 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX1O43812 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX1O43812 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX1O43812 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX1O43812 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.35■□□□□ 0.53
DUX1O43812 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX1O43812 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.35■□□□□ 0.53
DUX1O43812 HOMER2P1-201ENST00000455653 964 ntBASIC18.35■□□□□ 0.53
DUX1O43812 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.35■□□□□ 0.53
DUX1O43812 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.35■□□□□ 0.53
DUX1O43812 AC011558.1-201ENST00000623459 338 ntBASIC18.35■□□□□ 0.53
DUX1O43812 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DUX1O43812 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUX1O43812 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.34■□□□□ 0.53
DUX1O43812 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.34■□□□□ 0.53
DUX1O43812 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.34■□□□□ 0.53
DUX1O43812 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.34■□□□□ 0.53
DUX1O43812 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.34■□□□□ 0.53
DUX1O43812 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.34■□□□□ 0.53
DUX1O43812 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 AL023973.1-201ENST00000624619 620 ntBASIC18.34■□□□□ 0.53
DUX1O43812 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.34■□□□□ 0.53
DUX1O43812 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.34■□□□□ 0.53
DUX1O43812 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
DUX1O43812 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
DUX1O43812 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX1O43812 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.33■□□□□ 0.53
DUX1O43812 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DUX1O43812 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX1O43812 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX1O43812 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.33■□□□□ 0.53
DUX1O43812 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
DUX1O43812 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DUX1O43812 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
DUX1O43812 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.33■□□□□ 0.52
DUX1O43812 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.33■□□□□ 0.52
DUX1O43812 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
DUX1O43812 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
DUX1O43812 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
DUX1O43812 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX1O43812 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms