Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 TSPY21P-201ENST00000433481 731 ntBASIC17.07■□□□□ 0.32
TRAF3IP2O43734 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 AC026271.3-201ENST00000571884 352 ntBASIC17.07■□□□□ 0.32
TRAF3IP2O43734 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 IRX1P1-201ENST00000438849 1838 ntBASIC17.07■□□□□ 0.32
TRAF3IP2O43734 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF3IP2O43734 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.06■□□□□ 0.32
TRAF3IP2O43734 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 TSPY23P-201ENST00000440136 739 ntBASIC17.06■□□□□ 0.32
TRAF3IP2O43734 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 CR392000.1-201ENST00000624770 1228 ntBASIC17.06■□□□□ 0.32
TRAF3IP2O43734 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF3IP2O43734 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 AL049812.1-201ENST00000432563 2267 ntBASIC17.05■□□□□ 0.32
TRAF3IP2O43734 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 AP000974.1-201ENST00000623909 2387 ntBASIC17.05■□□□□ 0.32
TRAF3IP2O43734 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 AC012618.2-201ENST00000428058 849 ntBASIC17.05■□□□□ 0.32
TRAF3IP2O43734 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 RCC2P6-201ENST00000526625 1557 ntBASIC17.05■□□□□ 0.32
TRAF3IP2O43734 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAF3IP2O43734 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 FP475955.4-201ENST00000623131 1990 ntBASIC17.04■□□□□ 0.32
TRAF3IP2O43734 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAF3IP2O43734 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms