Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SGCEO43556 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.92■□□□□ 0.3
SGCEO43556 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SGCEO43556 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SGCEO43556 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.92■□□□□ 0.3
SGCEO43556 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SGCEO43556 RN7SL471P-201ENST00000580476 299 ntBASIC16.92■□□□□ 0.3
SGCEO43556 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SGCEO43556 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.92■□□□□ 0.3
SGCEO43556 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SGCEO43556 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 AC104417.2-201ENST00000562989 1793 ntBASIC16.92■□□□□ 0.3
SGCEO43556 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
SGCEO43556 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SGCEO43556 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
SGCEO43556 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.91■□□□□ 0.3
SGCEO43556 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.91■□□□□ 0.3
SGCEO43556 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.91■□□□□ 0.3
SGCEO43556 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.91■□□□□ 0.3
SGCEO43556 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SGCEO43556 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 FAM201B-201ENST00000458407 597 ntBASIC16.91■□□□□ 0.3
SGCEO43556 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 C1QL1P1-201ENST00000568105 661 ntBASIC16.91■□□□□ 0.3
SGCEO43556 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.91■□□□□ 0.3
SGCEO43556 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SGCEO43556 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SGCEO43556 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.91■□□□□ 0.3
SGCEO43556 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SGCEO43556 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCEO43556 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SGCEO43556 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SGCEO43556 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SGCEO43556 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCEO43556 KRT16P5-201ENST00000455284 522 ntBASIC16.9■□□□□ 0.3
SGCEO43556 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCEO43556 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.9■□□□□ 0.3
SGCEO43556 AC124016.1-201ENST00000609552 612 ntBASIC16.9■□□□□ 0.3
SGCEO43556 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.9■□□□□ 0.3
SGCEO43556 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCEO43556 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SGCEO43556 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SGCEO43556 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCEO43556 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
SGCEO43556 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SGCEO43556 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.89■□□□□ 0.29
SGCEO43556 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCEO43556 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCEO43556 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms