Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.12□□□□□ -0.31
NDUFA1O15239 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.12□□□□□ -0.31
NDUFA1O15239 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NDUFA1O15239 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA1O15239 TEX21P-204ENST00000641479 1693 ntBASIC13.12□□□□□ -0.31
NDUFA1O15239 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NDUFA1O15239 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NDUFA1O15239 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
NDUFA1O15239 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.11□□□□□ -0.31
NDUFA1O15239 KRT18P68-201ENST00000392293 1000 ntBASIC13.11□□□□□ -0.31
NDUFA1O15239 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.11□□□□□ -0.31
NDUFA1O15239 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.11□□□□□ -0.31
NDUFA1O15239 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.11□□□□□ -0.31
NDUFA1O15239 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.11□□□□□ -0.31
NDUFA1O15239 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.11□□□□□ -0.31
NDUFA1O15239 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.11□□□□□ -0.31
NDUFA1O15239 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.11□□□□□ -0.31
NDUFA1O15239 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NDUFA1O15239 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.11□□□□□ -0.31
NDUFA1O15239 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.11□□□□□ -0.31
NDUFA1O15239 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
NDUFA1O15239 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDUFA1O15239 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.1□□□□□ -0.31
NDUFA1O15239 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 PHGDH-210ENST00000641115 1638 ntBASIC13.1□□□□□ -0.31
NDUFA1O15239 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.1□□□□□ -0.31
NDUFA1O15239 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NDUFA1O15239 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.1□□□□□ -0.31
NDUFA1O15239 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 AC068880.1-201ENST00000507289 2297 ntBASIC13.1□□□□□ -0.31
NDUFA1O15239 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NDUFA1O15239 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.1□□□□□ -0.31
NDUFA1O15239 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NDUFA1O15239 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms