Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.35■□□□□ 0.69
NPC1O15118 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.35■□□□□ 0.69
NPC1O15118 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.35■□□□□ 0.69
NPC1O15118 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.35■□□□□ 0.69
NPC1O15118 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.35■□□□□ 0.69
NPC1O15118 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.35■□□□□ 0.69
NPC1O15118 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.35■□□□□ 0.69
NPC1O15118 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NPC1O15118 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.34■□□□□ 0.69
NPC1O15118 AL031133.1-201ENST00000406807 723 ntBASIC19.34■□□□□ 0.69
NPC1O15118 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.34■□□□□ 0.69
NPC1O15118 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.34■□□□□ 0.69
NPC1O15118 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.34■□□□□ 0.69
NPC1O15118 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.34■□□□□ 0.69
NPC1O15118 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.34■□□□□ 0.69
NPC1O15118 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.34■□□□□ 0.69
NPC1O15118 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NPC1O15118 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NPC1O15118 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NPC1O15118 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
NPC1O15118 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NPC1O15118 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.33■□□□□ 0.68
NPC1O15118 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.33■□□□□ 0.68
NPC1O15118 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.33■□□□□ 0.68
NPC1O15118 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.33■□□□□ 0.68
NPC1O15118 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.33■□□□□ 0.68
NPC1O15118 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.33■□□□□ 0.68
NPC1O15118 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.33■□□□□ 0.68
NPC1O15118 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.33■□□□□ 0.68
NPC1O15118 AL121956.5-201ENST00000625261 221 ntBASIC19.33■□□□□ 0.68
NPC1O15118 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NPC1O15118 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.33■□□□□ 0.68
NPC1O15118 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 KRT8P45-201ENST00000414328 1447 ntBASIC19.33■□□□□ 0.68
NPC1O15118 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NPC1O15118 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NPC1O15118 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.32■□□□□ 0.68
NPC1O15118 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NPC1O15118 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.32■□□□□ 0.68
NPC1O15118 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.32■□□□□ 0.68
NPC1O15118 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NPC1O15118 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NPC1O15118 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
NPC1O15118 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.31■□□□□ 0.68
NPC1O15118 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.31■□□□□ 0.68
NPC1O15118 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.31■□□□□ 0.68
NPC1O15118 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NPC1O15118 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
NPC1O15118 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms