Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
KPNA4O00629 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KPNA4O00629 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
KPNA4O00629 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
KPNA4O00629 AC018553.1-201ENST00000616682 1458 ntBASIC17.89■□□□□ 0.45
KPNA4O00629 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
KPNA4O00629 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
KPNA4O00629 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 DUSP5P2-201ENST00000426873 1033 ntBASIC17.89■□□□□ 0.45
KPNA4O00629 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.89■□□□□ 0.45
KPNA4O00629 AC083906.2-201ENST00000511578 360 ntBASIC17.89■□□□□ 0.45
KPNA4O00629 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 AL121832.2-201ENST00000610979 668 ntBASIC17.89■□□□□ 0.45
KPNA4O00629 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KPNA4O00629 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.89■□□□□ 0.45
KPNA4O00629 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KPNA4O00629 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.88■□□□□ 0.45
KPNA4O00629 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KPNA4O00629 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
KPNA4O00629 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.88■□□□□ 0.45
KPNA4O00629 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KPNA4O00629 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
KPNA4O00629 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KPNA4O00629 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 AC135050.7-201ENST00000624508 2218 ntBASIC17.87■□□□□ 0.45
KPNA4O00629 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.87■□□□□ 0.45
KPNA4O00629 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 AL390719.1-204ENST00000412397 1219 ntBASIC17.87■□□□□ 0.45
KPNA4O00629 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.87■□□□□ 0.45
KPNA4O00629 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KPNA4O00629 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
KPNA4O00629 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KPNA4O00629 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
KPNA4O00629 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.86■□□□□ 0.45
KPNA4O00629 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.86■□□□□ 0.45
KPNA4O00629 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KPNA4O00629 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
KPNA4O00629 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.86■□□□□ 0.45
KPNA4O00629 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.86■□□□□ 0.45
KPNA4O00629 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.86■□□□□ 0.45
KPNA4O00629 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.86■□□□□ 0.45
KPNA4O00629 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.86■□□□□ 0.45
KPNA4O00629 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KPNA4O00629 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms