Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDC7O00311 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDC7O00311 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDC7O00311 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CDC7O00311 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CDC7O00311 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC7O00311 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC7O00311 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC7O00311 KRT16P5-201ENST00000455284 522 ntBASIC18.8■□□□□ 0.6
CDC7O00311 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC7O00311 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC7O00311 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDC7O00311 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC7O00311 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.79■□□□□ 0.6
CDC7O00311 AC128676.1-201ENST00000454392 318 ntBASIC18.79■□□□□ 0.6
CDC7O00311 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.79■□□□□ 0.6
CDC7O00311 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.79■□□□□ 0.6
CDC7O00311 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDC7O00311 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC7O00311 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CDC7O00311 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDC7O00311 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC7O00311 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDC7O00311 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDC7O00311 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 FEM1AP3-201ENST00000403722 1741 ntBASIC18.78■□□□□ 0.6
CDC7O00311 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDC7O00311 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC7O00311 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC7O00311 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.78■□□□□ 0.6
CDC7O00311 AC133681.1-201ENST00000465482 601 ntBASIC18.78■□□□□ 0.6
CDC7O00311 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 AC110285.5-201ENST00000611501 352 ntBASIC18.78■□□□□ 0.6
CDC7O00311 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CDC7O00311 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC7O00311 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC7O00311 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.77■□□□□ 0.6
CDC7O00311 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
CDC7O00311 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC7O00311 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC7O00311 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC7O00311 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC7O00311 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.77■□□□□ 0.6
CDC7O00311 POU5F1P3-201ENST00000428824 1078 ntBASIC18.77■□□□□ 0.6
CDC7O00311 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.77■□□□□ 0.6
CDC7O00311 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC7O00311 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.77■□□□□ 0.6
CDC7O00311 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDC7O00311 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDC7O00311 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.77■□□□□ 0.6
CDC7O00311 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC7O00311 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CDC7O00311 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC7O00311 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC7O00311 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDC7O00311 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.76■□□□□ 0.59
CDC7O00311 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDC7O00311 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms