Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 CRYGFP-201ENST00000418459 633 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC004980.1-204ENST00000429707 299 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 DUX4L26-201ENST00000489078 1255 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 LINC01238-205ENST00000567549 1107 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC125437.2-201ENST00000625180 2167 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC005332.8-201ENST00000622750 2735 ntBASIC18.8■□□□□ 0.6
TMX2-CTNND1H3BSU7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMX2-CTNND1H3BSU7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC011506.1-201ENST00000474329 610 ntBASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 AP000692.2-201ENST00000608391 879 ntBASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 AC130371.2-201ENST00000619443 611 ntBASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMX2-CTNND1H3BSU7 FP700111.2-201ENST00000619190 1892 ntBASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 BX664615.1-201ENST00000443558 458 ntBASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 PHGDH-210ENST00000641115 1638 ntBASIC18.77■□□□□ 0.6
TMX2-CTNND1H3BSU7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TMX2-CTNND1H3BSU7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
TMX2-CTNND1H3BSU7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMX2-CTNND1H3BSU7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms