Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 MIR6084-201ENST00000622012 110 ntBASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 AC083906.6-201ENST00000641366 219 ntBASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGB1P1B2RPK0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 EDA-201ENST00000338901 1233 ntBASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 YBX1P1-201ENST00000445822 960 ntBASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HMGB1P1B2RPK0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 MIR939-201ENST00000401314 82 ntBASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 AC091305.1-201ENST00000479476 895 ntBASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 AC023632.3-201ENST00000521633 145 ntBASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGB1P1B2RPK0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 MFSD11-216ENST00000590393 1141 ntBASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 AL591742.1-201ENST00000604433 565 ntBASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 SDHAP1-207ENST00000440850 2000 ntBASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 LINC00896-202ENST00000609602 2128 ntBASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGB1P1B2RPK0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 AC116351.2-201ENST00000606540 1585 ntBASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGB1P1B2RPK0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms