Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC01546A6NGU7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 AP001330.3-201ENST00000520123 633 ntBASIC13.53□□□□□ -0.24
LINC01546A6NGU7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.53□□□□□ -0.24
LINC01546A6NGU7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PCDHA12-202ENST00000613593 2588 ntBASIC13.53□□□□□ -0.24
LINC01546A6NGU7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC01546A6NGU7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.52□□□□□ -0.24
LINC01546A6NGU7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LINC01546A6NGU7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.52□□□□□ -0.25
LINC01546A6NGU7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01546A6NGU7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms