Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 IFNL4P1-201ENST00000607083 540 ntBASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 AL162377.1-201ENST00000618844 1793 ntBASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC29.51■■■□□ 2.31
PLEKHD1A6NEE1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PLEKHD1A6NEE1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 MIR662-201ENST00000384847 95 ntBASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 TSPY19P-201ENST00000418461 509 ntBASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 GRAMD4P1-201ENST00000435181 1110 ntBASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 TSPY18P-201ENST00000441642 509 ntBASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 MIR3180-5-201ENST00000583743 153 ntBASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PLEKHD1A6NEE1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PLEKHD1A6NEE1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 AL157888.1-201ENST00000631930 593 ntBASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
PLEKHD1A6NEE1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 EMBP1-201ENST00000458200 901 ntBASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 AC009078.2-202ENST00000463353 338 ntBASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
PLEKHD1A6NEE1 KRT18P1-202ENST00000452408 1331 ntBASIC29.45■■■□□ 2.31
PLEKHD1A6NEE1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms