Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TCRBV4S1A1TA0A5B7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC211429.1-201ENST00000415277 523 ntBASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ECEL1P3-201ENST00000427961 737 ntBASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC026471.5-201ENST00000615068 467 ntBASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TCRBV4S1A1TA0A5B7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FAM197Y1-201ENST00000421178 764 ntBASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CD177P1-201ENST00000606252 935 ntBASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 AC073195.1-201ENST00000607241 877 ntBASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TCRBV4S1A1TA0A5B7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LINC01465-201ENST00000408887 1940 ntBASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 LINC01023-201ENST00000606054 436 ntBASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCRBV4S1A1TA0A5B7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms