Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 AL355802.2-201ENST00000402069 882 ntBASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 AC008687.6-201ENST00000596318 630 ntBASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 KRT8P8-201ENST00000434750 1448 ntBASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 TEX21P-204ENST00000641479 1693 ntBASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV12-3A0A0B4J271 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 AL121829.2-201ENST00000620908 328 ntBASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV12-3A0A0B4J271 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV12-3A0A0B4J271 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms