Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 AC023632.3-201ENST00000521633 145 ntBASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 C2orf69P4-201ENST00000565394 541 ntBASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 AL138781.2-201ENST00000617896 1843 ntBASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV13-1A0A0B4J241 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 AL049812.1-201ENST00000432563 2267 ntBASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 AC018553.1-201ENST00000616682 1458 ntBASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV13-1A0A0B4J241 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 AC104581.1-202ENST00000635932 2618 ntBASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 CYP2T1P-201ENST00000432607 1285 ntBASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 LTB4R2-202ENST00000528054 3092 ntBASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV13-1A0A0B4J241 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms