Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AC010980.2-201ENST00000587099 1412 ntBASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AL512353.2-201ENST00000448759 1962 ntBASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TFP1-202ENST00000475455 1573 ntBASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PCDHB18P-201ENST00000524813 2368 ntBASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AC079598.2-202ENST00000546624 1451 ntBASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 IRX1P1-201ENST00000438849 1838 ntBASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 BCL2-203ENST00000589955 5011 ntBASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AC016769.1-201ENST00000409132 1010 ntBASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 AC093525.10-201ENST00000625130 1569 ntBASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-1A0A0A6YYK1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV8-1A0A0A6YYK1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms