Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNFP41002 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNFP41002 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNFP41002 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNFP41002 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNFP41002 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNFP41002 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.01□□□□□ -1.61
CCNFP41002 AC006504.6-201ENST00000590142 199 ntBASIC5.01□□□□□ -1.61
CCNFP41002 AL121612.2-201ENST00000612261 482 ntBASIC5.01□□□□□ -1.61
CCNFP41002 AC099669.2-201ENST00000616549 437 ntBASIC5.01□□□□□ -1.61
CCNFP41002 MIR6730-201ENST00000622213 67 ntBASIC5.01□□□□□ -1.61
CCNFP41002 AC055839.1-201ENST00000634467 498 ntBASIC5.01□□□□□ -1.61
CCNFP41002 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNFP41002 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.01□□□□□ -1.61
CCNFP41002 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5□□□□□ -1.61
CCNFP41002 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CCNFP41002 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CCNFP41002 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 SNORA73.1-201ENST00000363107 205 ntBASIC5□□□□□ -1.61
CCNFP41002 Y_RNA.128-201ENST00000363391 112 ntBASIC5□□□□□ -1.61
CCNFP41002 SNORA4.3-201ENST00000365564 137 ntBASIC5□□□□□ -1.61
CCNFP41002 RNU6-474P-201ENST00000384243 107 ntBASIC5□□□□□ -1.61
CCNFP41002 RNU6-171P-201ENST00000384354 107 ntBASIC5□□□□□ -1.61
CCNFP41002 MTCYBP4-201ENST00000401524 249 ntBASIC5□□□□□ -1.61
CCNFP41002 AL592114.1-201ENST00000403842 483 ntBASIC5□□□□□ -1.61
CCNFP41002 AL359634.1-202ENST00000404721 284 ntBASIC5□□□□□ -1.61
CCNFP41002 U3.36-201ENST00000408418 213 ntBASIC5□□□□□ -1.61
CCNFP41002 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5□□□□□ -1.61
CCNFP41002 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5□□□□□ -1.61
CCNFP41002 RPL30P2-201ENST00000414021 291 ntBASIC5□□□□□ -1.61
CCNFP41002 E2F6P2-201ENST00000420708 748 ntBASIC5□□□□□ -1.61
CCNFP41002 RPL7P46-201ENST00000425129 740 ntBASIC5□□□□□ -1.61
CCNFP41002 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5□□□□□ -1.61
CCNFP41002 GPM6BP2-201ENST00000432046 144 ntBASIC5□□□□□ -1.61
CCNFP41002 CKS1BP5-201ENST00000434172 273 ntBASIC5□□□□□ -1.61
CCNFP41002 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5□□□□□ -1.61
CCNFP41002 GPM6BP1-201ENST00000446387 144 ntBASIC5□□□□□ -1.61
CCNFP41002 KNOP1P3-201ENST00000446933 426 ntBASIC5□□□□□ -1.61
CCNFP41002 FABP5P13-201ENST00000452144 328 ntBASIC5□□□□□ -1.61
CCNFP41002 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 AC006967.1-201ENST00000467608 589 ntBASIC5□□□□□ -1.61
CCNFP41002 AC097484.1-201ENST00000471148 389 ntBASIC5□□□□□ -1.61
CCNFP41002 Y_RNA.654-201ENST00000497848 106 ntBASIC5□□□□□ -1.61
CCNFP41002 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5□□□□□ -1.61
CCNFP41002 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5□□□□□ -1.61
CCNFP41002 RPL39P5-202ENST00000512505 151 ntBASIC5□□□□□ -1.61
CCNFP41002 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5□□□□□ -1.61
CCNFP41002 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5□□□□□ -1.61
CCNFP41002 RNU6-1088P-201ENST00000516850 104 ntBASIC5□□□□□ -1.61
CCNFP41002 Y_RNA.718-201ENST00000517110 102 ntBASIC5□□□□□ -1.61
CCNFP41002 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5□□□□□ -1.61
CCNFP41002 AL137161.1-201ENST00000532231 390 ntBASIC5□□□□□ -1.61
CCNFP41002 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5□□□□□ -1.61
CCNFP41002 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5□□□□□ -1.61
CCNFP41002 AC092747.3-201ENST00000603769 301 ntBASIC5□□□□□ -1.61
CCNFP41002 SDR42E1P1-201ENST00000611327 477 ntBASIC5□□□□□ -1.61
CCNFP41002 DUSP12P1-201ENST00000612874 516 ntBASIC5□□□□□ -1.61
CCNFP41002 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCNFP41002 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5□□□□□ -1.61
CCNFP41002 SALL4P2-201ENST00000423288 2910 ntBASIC5□□□□□ -1.61
CCNFP41002 AC104118.1-201ENST00000607625 1589 ntBASIC4.99□□□□□ -1.61
CCNFP41002 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNFP41002 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNFP41002 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 AC009643.2-201ENST00000603543 1448 ntBASIC4.99□□□□□ -1.61
CCNFP41002 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNFP41002 EXOC5P1-201ENST00000510543 1969 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AC090229.1-201ENST00000590983 1609 ntBASIC4.99□□□□□ -1.61
CCNFP41002 XIAPP3-201ENST00000312918 795 ntBASIC4.99□□□□□ -1.61
CCNFP41002 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNFP41002 SNORD116-29-201ENST00000384516 83 ntBASIC4.99□□□□□ -1.61
CCNFP41002 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCNFP41002 MIR937-201ENST00000401271 86 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.99□□□□□ -1.61
CCNFP41002 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNFP41002 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms