Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL358232.1-201ENST00000448030 501 ntBASIC3.47□□□□□ -1.85
SSX4O60224 HMGB3P8-201ENST00000449709 577 ntBASIC3.47□□□□□ -1.85
SSX4O60224 MTCO3P20-201ENST00000454926 688 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC093278.1-201ENST00000494700 600 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 KLHL2P1-201ENST00000508691 521 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.47□□□□□ -1.85
SSX4O60224 RN7SKP83-201ENST00000516512 178 ntBASIC3.47□□□□□ -1.85
SSX4O60224 RNU7-143P-201ENST00000516781 65 ntBASIC3.47□□□□□ -1.85
SSX4O60224 IGKV2-23-201ENST00000518729 323 ntBASIC3.47□□□□□ -1.85
SSX4O60224 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.47□□□□□ -1.85
SSX4O60224 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.47□□□□□ -1.85
SSX4O60224 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.47□□□□□ -1.85
SSX4O60224 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
SSX4O60224 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.47□□□□□ -1.85
SSX4O60224 MIR3186-201ENST00000577404 85 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC008507.1-201ENST00000587506 734 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.47□□□□□ -1.85
SSX4O60224 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC092628.2-201ENST00000622492 339 ntBASIC3.47□□□□□ -1.85
SSX4O60224 AC091905.1-201ENST00000624400 311 ntBASIC3.47□□□□□ -1.85
SSX4O60224 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SSX4O60224 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.47□□□□□ -1.85
SSX4O60224 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.46□□□□□ -1.85
SSX4O60224 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 AL133383.2-201ENST00000622958 2336 ntBASIC3.46□□□□□ -1.86
SSX4O60224 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.46□□□□□ -1.86
SSX4O60224 U3.20-201ENST00000390909 217 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL391417.1-201ENST00000404100 426 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL359704.1-201ENST00000411586 781 ntBASIC3.46□□□□□ -1.86
SSX4O60224 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.46□□□□□ -1.86
SSX4O60224 DUTP6-201ENST00000425573 462 ntBASIC3.46□□□□□ -1.86
SSX4O60224 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 AL445584.1-201ENST00000431451 330 ntBASIC3.46□□□□□ -1.86
SSX4O60224 OR4K11P-201ENST00000431829 904 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AC109583.1-201ENST00000432156 268 ntBASIC3.46□□□□□ -1.86
SSX4O60224 VDAC1P3-201ENST00000434069 851 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 AC006011.1-201ENST00000442758 349 ntBASIC3.46□□□□□ -1.86
SSX4O60224 BMI1P1-201ENST00000445879 941 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX4O60224 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX4O60224 MTCO1P42-201ENST00000457379 726 ntBASIC3.46□□□□□ -1.86
SSX4O60224 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX4O60224 snoU13.4-201ENST00000458916 104 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL139099.1-201ENST00000497398 403 ntBASIC3.46□□□□□ -1.86
SSX4O60224 MLLT10P2-201ENST00000506434 249 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX4O60224 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX4O60224 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.46□□□□□ -1.86
SSX4O60224 AC022968.1-201ENST00000567372 442 ntBASIC3.46□□□□□ -1.86
SSX4O60224 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 UBE2L4-201ENST00000587688 464 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL590229.1-201ENST00000603497 542 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AC024220.1-201ENST00000603675 484 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL022099.1-201ENST00000604551 712 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL592436.1-201ENST00000605135 558 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.46□□□□□ -1.86
SSX4O60224 AL158801.5-201ENST00000623123 465 ntBASIC3.46□□□□□ -1.86
SSX4O60224 AC093591.3-201ENST00000634516 308 ntBASIC3.46□□□□□ -1.86
SSX4O60224 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.46□□□□□ -1.86
SSX4O60224 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SSX4O60224 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSX4O60224 MTCO1P9-201ENST00000505577 1534 ntBASIC3.45□□□□□ -1.86
SSX4O60224 ELL2P3-201ENST00000457883 1602 ntBASIC3.45□□□□□ -1.86
SSX4O60224 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SSX4O60224 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SSX4O60224 SNORA60-201ENST00000362396 134 ntBASIC3.45□□□□□ -1.86
SSX4O60224 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SSX4O60224 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.45□□□□□ -1.86
SSX4O60224 UBE2V1P13-201ENST00000436983 439 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.45□□□□□ -1.86
SSX4O60224 TRIM60P18-201ENST00000441518 828 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC118469.1-201ENST00000442943 488 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.45□□□□□ -1.86
SSX4O60224 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
SSX4O60224 AC234775.1-201ENST00000454247 670 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AC007967.1-201ENST00000455422 1159 ntBASIC3.45□□□□□ -1.86
SSX4O60224 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms