RNA–Protein interactions for RNA: ENST00000390909.2

U3.20-201, humanhuman

BASIC

Gene U3, Length 217 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.20-201ENST00000390909 AEBP2Q6ZN18 517 aaPredicted RBP16.1■□□□□ 0.17
U3.20-201ENST00000390909 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
U3.20-201ENST00000390909 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
U3.20-201ENST00000390909 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
U3.20-201ENST00000390909 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
U3.20-201ENST00000390909 FOXD1Q16676 465 aa12.57□□□□□ -0.4
U3.20-201ENST00000390909 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
U3.20-201ENST00000390909 ADRA2BP18089 450 aa12.35□□□□□ -0.43
U3.20-201ENST00000390909 PIAS4Q8N2W9 510 aaPredicted RBP11.91□□□□□ -0.5
U3.20-201ENST00000390909 KCNA4P22459 653 aa11.72□□□□□ -0.53
U3.20-201ENST00000390909 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
U3.20-201ENST00000390909 MSH5O43196 834 aa11.42□□□□□ -0.58
U3.20-201ENST00000390909 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
U3.20-201ENST00000390909 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
U3.20-201ENST00000390909 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
U3.20-201ENST00000390909 SCAF1Q9H7N4 1312 aaKnown RBP11.24□□□□□ -0.61
U3.20-201ENST00000390909 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
U3.20-201ENST00000390909 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
U3.20-201ENST00000390909 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
U3.20-201ENST00000390909 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
U3.20-201ENST00000390909 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.66
U3.20-201ENST00000390909 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
U3.20-201ENST00000390909 DNAJC5BQ9UF47 199 aa10.87□□□□□ -0.67
U3.20-201ENST00000390909 ZBTB22O15209 634 aa10.82□□□□□ -0.68
U3.20-201ENST00000390909 HOXD11P31277 338 aaPredicted RBP10.79□□□□□ -0.68
U3.20-201ENST00000390909 FOXD4L1Q9NU39 408 aa10.67□□□□□ -0.7
U3.20-201ENST00000390909 SLC4A2P04920 1241 aa10.55□□□□□ -0.72
U3.20-201ENST00000390909 DCAF8L1A6NGE4 600 aa10.36□□□□□ -0.75
U3.20-201ENST00000390909 MYCNP04198 464 aaPredicted RBP10.36□□□□□ -0.75
U3.20-201ENST00000390909 ATXN8OSP0DMR3 200 aa10.26□□□□□ -0.77
U3.20-201ENST00000390909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
U3.20-201ENST00000390909 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
U3.20-201ENST00000390909 ATF5Q9Y2D1 282 aaPredicted RBP10.1□□□□□ -0.79
U3.20-201ENST00000390909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.08□□□□□ -0.8
U3.20-201ENST00000390909 HNRNPUL2Q1KMD3 747 aaKnown RBP10.08□□□□□ -0.8
U3.20-201ENST00000390909 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
U3.20-201ENST00000390909 APLP2Q06481 763 aa9.89□□□□□ -0.83
U3.20-201ENST00000390909 FKBP8Q14318 412 aa9.89□□□□□ -0.83
U3.20-201ENST00000390909 POTEDQ86YR6 584 aa9.88□□□□□ -0.83
U3.20-201ENST00000390909 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
U3.20-201ENST00000390909 RNF39Q9H2S5 420 aa9.85□□□□□ -0.83
U3.20-201ENST00000390909 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
U3.20-201ENST00000390909 TRHP20396 242 aaPredicted RBP9.73□□□□□ -0.85
U3.20-201ENST00000390909 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
U3.20-201ENST00000390909 CAPN15O75808 1086 aa9.69□□□□□ -0.86
U3.20-201ENST00000390909 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
U3.20-201ENST00000390909 POLA2Q14181 598 aa9.65□□□□□ -0.86
U3.20-201ENST00000390909 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
U3.20-201ENST00000390909 FBLN2P98095 1184 aa9.58□□□□□ -0.88
U3.20-201ENST00000390909 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
U3.20-201ENST00000390909 ABCB7O75027 752 aa9.57□□□□□ -0.88
U3.20-201ENST00000390909 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
U3.20-201ENST00000390909 PROM2Q8N271 834 aa9.5□□□□□ -0.89
U3.20-201ENST00000390909 ZBTB12Q9Y330 459 aaPredicted RBP9.49□□□□□ -0.89
U3.20-201ENST00000390909 DSG3P32926 999 aa9.48□□□□□ -0.89
U3.20-201ENST00000390909 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
U3.20-201ENST00000390909 CACNB1Q02641 598 aaPredicted RBP9.33□□□□□ -0.92
U3.20-201ENST00000390909 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
U3.20-201ENST00000390909 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
U3.20-201ENST00000390909 SPDYE2BA6NHP3 402 aa9.28□□□□□ -0.92
U3.20-201ENST00000390909 SPDYE6P0CI01 402 aa9.28□□□□□ -0.92
U3.20-201ENST00000390909 SPDYE2Q495Y8 402 aa9.28□□□□□ -0.92
U3.20-201ENST00000390909 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
U3.20-201ENST00000390909 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
U3.20-201ENST00000390909 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
U3.20-201ENST00000390909 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
U3.20-201ENST00000390909 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
U3.20-201ENST00000390909 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
U3.20-201ENST00000390909 PKD2Q13563 968 aa9.05□□□□□ -0.96
U3.20-201ENST00000390909 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
U3.20-201ENST00000390909 PLCD3Q8N3E9 789 aa9.05□□□□□ -0.96
U3.20-201ENST00000390909 SPOCK2Q92563 424 aa9.04□□□□□ -0.96
U3.20-201ENST00000390909 MIER1Q8N108 512 aa9.02□□□□□ -0.97
U3.20-201ENST00000390909 RBM42Q9BTD8 480 aaKnown RBP8.99□□□□□ -0.97
U3.20-201ENST00000390909 AKT1S1Q96B36 256 aa8.96□□□□□ -0.98
U3.20-201ENST00000390909 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
U3.20-201ENST00000390909 DCAF8L2P0C7V8 631 aa8.92□□□□□ -0.98
U3.20-201ENST00000390909 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
U3.20-201ENST00000390909 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
U3.20-201ENST00000390909 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
U3.20-201ENST00000390909 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
U3.20-201ENST00000390909 CLEC11AQ9Y240 323 aa8.86□□□□□ -0.99
U3.20-201ENST00000390909 PLCB2Q00722 1185 aa8.85□□□□□ -0.99
U3.20-201ENST00000390909 RGL2O15211 777 aa8.84□□□□□ -0.99
U3.20-201ENST00000390909 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
U3.20-201ENST00000390909 PRR29P0C7W0 189 aa8.83□□□□□ -1
U3.20-201ENST00000390909 CREBZFQ9NS37 354 aa8.83□□□□□ -1
U3.20-201ENST00000390909 PITPNM1O00562 1244 aa8.8□□□□□ -1
U3.20-201ENST00000390909 NUBP1P53384 320 aa8.8□□□□□ -1
U3.20-201ENST00000390909 MNX1P50219 401 aaPredicted RBP8.79□□□□□ -1
U3.20-201ENST00000390909 NPM1P06748 294 aaKnown RBP eCLIP8.78□□□□□ -1
U3.20-201ENST00000390909 TRIM41Q8WV44 630 aa8.76□□□□□ -1.01
U3.20-201ENST00000390909 GSE1Q14687 1217 aa8.75□□□□□ -1.01
U3.20-201ENST00000390909 BBXQ8WY36 941 aaPredicted RBP8.74□□□□□ -1.01
U3.20-201ENST00000390909 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
U3.20-201ENST00000390909 RNF25Q96BH1 459 aaPredicted RBP8.71□□□□□ -1.02
U3.20-201ENST00000390909 DCAF8Q5TAQ9 597 aa8.7□□□□□ -1.02
U3.20-201ENST00000390909 RASEFQ8IZ41 740 aa8.69□□□□□ -1.02
U3.20-201ENST00000390909 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
U3.20-201ENST00000390909 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms