Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 RPL23AP92-201ENST00000603609 255 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 MIR7844-201ENST00000616161 122 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC022149.2-201ENST00000621061 203 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC007494.3-201ENST00000624660 743 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 CYP3A51P-201ENST00000633513 256 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AC021755.1-201ENST00000559747 1447 ntBASIC4.01□□□□□ -1.77
DDX4Q9NQI0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
DDX4Q9NQI0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
DDX4Q9NQI0 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 SNORD6-201ENST00000365444 73 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 U3.19-201ENST00000390893 196 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AL391417.1-201ENST00000404100 426 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AL021407.1-201ENST00000404531 386 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 MIR1183-201ENST00000408856 89 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 OFD1P11Y-201ENST00000418213 1177 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC006989.1-201ENST00000427212 131 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 ZYG11AP1-201ENST00000430329 837 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 RPL7P28-201ENST00000437739 740 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 HMGN2P21-201ENST00000447764 270 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4□□□□□ -1.77
DDX4Q9NQI0 HMGN2P7-201ENST00000456186 273 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 RPL23AP62-201ENST00000463396 453 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 FAM172BP-201ENST00000487497 1089 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 MTCO3P28-201ENST00000513351 515 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 MTCYBP43-201ENST00000513621 740 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4□□□□□ -1.77
DDX4Q9NQI0 SCARNA13-201ENST00000516672 275 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 RNU4-60P-201ENST00000517239 135 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC104986.1-201ENST00000517978 436 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC106038.2-201ENST00000520706 568 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4□□□□□ -1.77
DDX4Q9NQI0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC092851.1-201ENST00000535964 478 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC012435.1-202ENST00000568772 240 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC136618.2-201ENST00000575091 400 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 MIR5004-201ENST00000579078 107 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC020914.4-201ENST00000597690 277 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AL162713.1-201ENST00000604480 262 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC009318.4-201ENST00000620496 486 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC048347.1-201ENST00000624621 427 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 AC068137.4-201ENST00000638485 296 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 AC006927.3-201ENST00000638789 384 ntBASIC4□□□□□ -1.77
DDX4Q9NQI0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4□□□□□ -1.77
DDX4Q9NQI0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
DDX4Q9NQI0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4□□□□□ -1.77
DDX4Q9NQI0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
DDX4Q9NQI0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
DDX4Q9NQI0 AF127577.6-201ENST00000623352 2191 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 Y_RNA.77-201ENST00000362962 107 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 RNA5SP235-201ENST00000365411 114 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 SNORA48.5-201ENST00000391143 135 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 ARF4P3-201ENST00000397387 509 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AL355379.1-201ENST00000405542 640 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 MTND1P20-201ENST00000430341 950 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC129850.1-201ENST00000436203 508 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 MTND1P30-201ENST00000441241 901 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AL671855.1-201ENST00000446875 1203 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 MEMO1P3-201ENST00000459811 302 ntBASIC3.99□□□□□ -1.77
DDX4Q9NQI0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX4Q9NQI0 AC087276.1-201ENST00000529659 480 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms