Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC136624.4-201ENST00000573044 370 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC008521.1-201ENST00000587471 187 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC006116.3-201ENST00000592968 361 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC108706.1-201ENST00000611053 297 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AL049794.2-201ENST00000616301 365 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-1255P-201ENST00000363434 112 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-393P-201ENST00000384475 107 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.541-201ENST00000384640 113 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC016739.1-201ENST00000405359 345 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 RPL19P1-201ENST00000411635 428 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AL096829.1-201ENST00000413677 457 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 CALM2P2-201ENST00000428512 440 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC016696.1-201ENST00000446949 318 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 RPS23P7-201ENST00000466210 444 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC114982.1-201ENST00000469402 321 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC069499.1-201ENST00000489433 509 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC008958.1-201ENST00000511047 682 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC074133.1-201ENST00000515696 183 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 SCARNA24.2-201ENST00000516968 130 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC025423.5-201ENST00000550230 219 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC005520.5-201ENST00000613926 164 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 TCL6_3.1-201ENST00000619064 137 ntBASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNTNAP3BQ96NU0 PARP4P2-201ENST00000446672 3326 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RNVU1-6-201ENST00000364688 164 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-708P-201ENST00000384217 107 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.458-201ENST00000384240 102 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RNU1-77P-201ENST00000390868 162 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-131P-201ENST00000391144 107 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RPS29P13-201ENST00000402041 169 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RNU2-15P-201ENST00000410692 191 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 HAUS6P2-201ENST00000433254 2404 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC091179.1-201ENST00000461606 579 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RPL9P9-202ENST00000466501 579 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RN7SL51P-201ENST00000468230 285 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC022034.3-201ENST00000471393 478 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RPL30P11-201ENST00000495304 339 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 RBBP4P6-201ENST00000508098 202 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 AC010343.2-201ENST00000510162 224 ntBASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.61□□□□□ -1.51
CNTNAP3BQ96NU0 SNORA70.11-201ENST00000515987 138 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms