Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 MIR4680-201ENST00000580906 66 ntBASIC5.07□□□□□ -1.6
ERVFC1P60507 GLUD1P4-201ENST00000590914 418 ntBASIC5.07□□□□□ -1.6
ERVFC1P60507 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.07□□□□□ -1.6
ERVFC1P60507 MIR6716-201ENST00000613413 80 ntBASIC5.07□□□□□ -1.6
ERVFC1P60507 uc_338.12-201ENST00000616344 181 ntBASIC5.07□□□□□ -1.6
ERVFC1P60507 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERVFC1P60507 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERVFC1P60507 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ERVFC1P60507 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERVFC1P60507 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERVFC1P60507 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ERVFC1P60507 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ERVFC1P60507 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 AL031595.2-201ENST00000624215 19071 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ERVFC1P60507 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
ERVFC1P60507 Y_RNA.148-201ENST00000363557 117 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 Y_RNA.149-201ENST00000363558 117 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 RNU6-702P-201ENST00000364982 107 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 RNU4-66P-201ENST00000365199 138 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 AL121834.1-202ENST00000404494 277 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 MIR1302-3-201ENST00000408128 138 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 RN7SKP27-201ENST00000410684 333 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 RN7SKP247-201ENST00000411094 308 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 AC140479.3-201ENST00000418944 1126 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 RPS17P8-201ENST00000434525 335 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.06□□□□□ -1.6
ERVFC1P60507 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 AC109327.1-201ENST00000471666 403 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 RN7SL558P-201ENST00000497468 299 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 RNU1-6P-201ENST00000516290 144 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.06□□□□□ -1.6
ERVFC1P60507 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.06□□□□□ -1.6
ERVFC1P60507 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.06□□□□□ -1.6
ERVFC1P60507 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.06□□□□□ -1.6
ERVFC1P60507 MIR3160-1-201ENST00000577972 85 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.06□□□□□ -1.6
ERVFC1P60507 MIR3939-201ENST00000582614 106 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 XPOTP1-201ENST00000443317 2398 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 MTND4P1-201ENST00000457501 1466 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
ERVFC1P60507 RAD17P1-201ENST00000418130 2042 ntBASIC5.06□□□□□ -1.6
ERVFC1P60507 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ERVFC1P60507 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ERVFC1P60507 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 AC134882.1-201ENST00000603738 1676 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.05□□□□□ -1.6
ERVFC1P60507 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
ERVFC1P60507 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.05□□□□□ -1.6
ERVFC1P60507 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.05□□□□□ -1.6
ERVFC1P60507 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
ERVFC1P60507 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.05□□□□□ -1.6
ERVFC1P60507 Y_RNA.188-201ENST00000363952 111 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 RNA5SP509-201ENST00000364577 119 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 MIR649-201ENST00000384843 97 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 RNU6-903P-201ENST00000391270 109 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 AL356421.1-201ENST00000403255 413 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 MIR548F5-201ENST00000408421 86 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 RNU6-370P-201ENST00000411008 104 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.05□□□□□ -1.6
ERVFC1P60507 RPS12P24-201ENST00000412619 387 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 RPL37P10-201ENST00000412884 288 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.05□□□□□ -1.6
ERVFC1P60507 AC092832.1-201ENST00000422934 400 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.05□□□□□ -1.6
ERVFC1P60507 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ERVFC1P60507 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.05□□□□□ -1.6
ERVFC1P60507 AL162591.2-201ENST00000449634 317 ntBASIC5.05□□□□□ -1.6
ERVFC1P60507 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.05□□□□□ -1.6
ERVFC1P60507 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms