Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SCARNA16.2-201ENST00000516520 172 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 SNORA40.15-201ENST00000516884 107 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 MIR5188-201ENST00000583467 113 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC244107.2-201ENST00000611773 76 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 uc_338.34-201ENST00000617467 174 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 uc_338.7-201ENST00000621834 124 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC026634.1-201ENST00000634369 198 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 CYP4F35P-202ENST00000636121 390 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC002525.1-201ENST00000624392 1622 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 Z95114.1-201ENST00000624264 14574 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
PDZRN3Q9UPQ7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
PDZRN3Q9UPQ7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 INTS6P1-201ENST00000504674 2530 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 THAP12P4-201ENST00000528321 2266 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 Y_RNA.8-201ENST00000362353 102 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RNA5SP87-201ENST00000384155 118 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MIR141-201ENST00000384975 95 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AL603910.2-201ENST00000407268 136 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RNU2-33P-201ENST00000410344 192 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AL360081.1-201ENST00000428299 555 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 SNAP23P1-201ENST00000433229 246 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 FCF1P4-201ENST00000448326 183 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 TPT1P13-201ENST00000449760 499 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 CHEK2P4-201ENST00000450340 246 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC009220.1-201ENST00000451614 275 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RNA5SP384-201ENST00000516615 116 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-861P-201ENST00000516745 106 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC063949.1-201ENST00000552900 865 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC018552.3-201ENST00000567416 561 ntBASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.77□□□□□ -1.33
PDZRN3Q9UPQ7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 RNU6-417P-201ENST00000384712 107 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 RPL7P60-201ENST00000397636 735 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 E2F6P2-201ENST00000420708 748 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 USP9YP30-201ENST00000430729 455 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 REG1CP-206ENST00000447469 496 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 Z92846.1-201ENST00000456203 268 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 RNU7-136P-201ENST00000458819 69 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 SNORA31.18-201ENST00000517043 134 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC027369.5-201ENST00000533838 755 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC090517.1-201ENST00000569307 266 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC011487.3-201ENST00000593607 453 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC010424.2-201ENST00000607594 443 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AL365222.1-201ENST00000614661 98 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC130454.1-201ENST00000622948 401 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 AC091905.4-201ENST00000623432 202 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 MIR4272-201ENST00000635924 64 ntBASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDZRN3Q9UPQ7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms