RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
SNORA40.15-201ENST00000516884 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
SNORA40.15-201ENST00000516884 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
SNORA40.15-201ENST00000516884 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
SNORA40.15-201ENST00000516884 FOXD1Q16676 465 aa14.36□□□□□ -0.11
SNORA40.15-201ENST00000516884 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
SNORA40.15-201ENST00000516884 MSH5O43196 834 aa13.42□□□□□ -0.26
SNORA40.15-201ENST00000516884 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
SNORA40.15-201ENST00000516884 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
SNORA40.15-201ENST00000516884 ADRA2BP18089 450 aa13.34□□□□□ -0.27
SNORA40.15-201ENST00000516884 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
SNORA40.15-201ENST00000516884 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
SNORA40.15-201ENST00000516884 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
SNORA40.15-201ENST00000516884 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
SNORA40.15-201ENST00000516884 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
SNORA40.15-201ENST00000516884 HOXD11P31277 338 aaPredicted RBP11.81□□□□□ -0.52
SNORA40.15-201ENST00000516884 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
SNORA40.15-201ENST00000516884 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
SNORA40.15-201ENST00000516884 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
SNORA40.15-201ENST00000516884 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
SNORA40.15-201ENST00000516884 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
SNORA40.15-201ENST00000516884 DNAJC5BQ9UF47 199 aa11.47□□□□□ -0.57
SNORA40.15-201ENST00000516884 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
SNORA40.15-201ENST00000516884 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
SNORA40.15-201ENST00000516884 C1QBPQ07021 282 aaKnown RBP11.3□□□□□ -0.6
SNORA40.15-201ENST00000516884 KCNA4P22459 653 aa11.15□□□□□ -0.62
SNORA40.15-201ENST00000516884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNORA40.15-201ENST00000516884 U3KPZ7 1027 aaPredicted RBP10.98□□□□□ -0.65
SNORA40.15-201ENST00000516884 SLC4A2P04920 1241 aa10.9□□□□□ -0.66
SNORA40.15-201ENST00000516884 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
SNORA40.15-201ENST00000516884 DSG3P32926 999 aa10.73□□□□□ -0.69
SNORA40.15-201ENST00000516884 CAPN15O75808 1086 aa10.7□□□□□ -0.7
SNORA40.15-201ENST00000516884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
SNORA40.15-201ENST00000516884 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
SNORA40.15-201ENST00000516884 APLP2Q06481 763 aa10.62□□□□□ -0.71
SNORA40.15-201ENST00000516884 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
SNORA40.15-201ENST00000516884 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
SNORA40.15-201ENST00000516884 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
SNORA40.15-201ENST00000516884 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
SNORA40.15-201ENST00000516884 SLC4A1APQ9BWU0 796 aaKnown RBP10.5□□□□□ -0.73
SNORA40.15-201ENST00000516884 ABCB7O75027 752 aa10.46□□□□□ -0.73
SNORA40.15-201ENST00000516884 FOXD4L1Q9NU39 408 aa10.41□□□□□ -0.74
SNORA40.15-201ENST00000516884 ZBTB22O15209 634 aa10.29□□□□□ -0.76
SNORA40.15-201ENST00000516884 POLA2Q14181 598 aa10.28□□□□□ -0.76
SNORA40.15-201ENST00000516884 ATF5Q9Y2D1 282 aaPredicted RBP10.28□□□□□ -0.76
SNORA40.15-201ENST00000516884 POTEHQ6S545 545 aa10.24□□□□□ -0.77
SNORA40.15-201ENST00000516884 RBM42Q9BTD8 480 aaKnown RBP10.22□□□□□ -0.77
SNORA40.15-201ENST00000516884 ATXN8OSP0DMR3 200 aa10.14□□□□□ -0.79
SNORA40.15-201ENST00000516884 ZBTB12Q9Y330 459 aaPredicted RBP10.12□□□□□ -0.79
SNORA40.15-201ENST00000516884 AKT1S1Q96B36 256 aa10□□□□□ -0.81
SNORA40.15-201ENST00000516884 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
SNORA40.15-201ENST00000516884 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
SNORA40.15-201ENST00000516884 REM2Q8IYK8 340 aaPredicted RBP9.89□□□□□ -0.83
SNORA40.15-201ENST00000516884 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
SNORA40.15-201ENST00000516884 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
SNORA40.15-201ENST00000516884 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
SNORA40.15-201ENST00000516884 FBLN2P98095 1184 aa9.82□□□□□ -0.84
SNORA40.15-201ENST00000516884 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
SNORA40.15-201ENST00000516884 PITPNM1O00562 1244 aa9.79□□□□□ -0.84
SNORA40.15-201ENST00000516884 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
SNORA40.15-201ENST00000516884 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
SNORA40.15-201ENST00000516884 FXR2P51116 673 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNORA40.15-201ENST00000516884 SSUH2Q9Y2M2 353 aa9.73□□□□□ -0.85
SNORA40.15-201ENST00000516884 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
SNORA40.15-201ENST00000516884 SPDYE1Q8NFV5 336 aaPredicted RBP9.62□□□□□ -0.87
SNORA40.15-201ENST00000516884 SP7Q8TDD2 431 aaPredicted RBP9.61□□□□□ -0.87
SNORA40.15-201ENST00000516884 EHMT2Q96KQ7 1210 aa9.56□□□□□ -0.88
SNORA40.15-201ENST00000516884 HAX1O00165 279 aa9.51□□□□□ -0.89
SNORA40.15-201ENST00000516884 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
SNORA40.15-201ENST00000516884 PRKAR2AP13861 404 aaKnown RBP9.5□□□□□ -0.89
SNORA40.15-201ENST00000516884 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNORA40.15-201ENST00000516884 EVX2Q03828 476 aa9.47□□□□□ -0.89
SNORA40.15-201ENST00000516884 C19orf67A6NJJ6 358 aa9.42□□□□□ -0.9
SNORA40.15-201ENST00000516884 PRR29P0C7W0 189 aa9.39□□□□□ -0.91
SNORA40.15-201ENST00000516884 CHADLQ6NUI6 762 aa9.37□□□□□ -0.91
SNORA40.15-201ENST00000516884 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
SNORA40.15-201ENST00000516884 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
SNORA40.15-201ENST00000516884 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
SNORA40.15-201ENST00000516884 GABBR2O75899 941 aa9.24□□□□□ -0.93
SNORA40.15-201ENST00000516884 CREBZFQ9NS37 354 aa9.24□□□□□ -0.93
SNORA40.15-201ENST00000516884 PROM2Q8N271 834 aa9.22□□□□□ -0.93
SNORA40.15-201ENST00000516884 CD44P16070 742 aaKnown RBP9.2□□□□□ -0.94
SNORA40.15-201ENST00000516884 CLCN6P51797 869 aa9.15□□□□□ -0.94
SNORA40.15-201ENST00000516884 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
SNORA40.15-201ENST00000516884 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
SNORA40.15-201ENST00000516884 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
SNORA40.15-201ENST00000516884 ZRANB1Q9UGI0 708 aa9.05□□□□□ -0.96
SNORA40.15-201ENST00000516884 NPM1P06748 294 aaKnown RBP eCLIP9.01□□□□□ -0.97
SNORA40.15-201ENST00000516884 LHX8Q68G74 356 aa8.99□□□□□ -0.97
SNORA40.15-201ENST00000516884 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
SNORA40.15-201ENST00000516884 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.98
SNORA40.15-201ENST00000516884 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
SNORA40.15-201ENST00000516884 DCBLD2Q96PD2 775 aa8.93□□□□□ -0.98
SNORA40.15-201ENST00000516884 CCDC61Q9Y6R9 512 aa8.88□□□□□ -0.99
SNORA40.15-201ENST00000516884 MS4A3Q96HJ5 214 aa8.85□□□□□ -0.99
SNORA40.15-201ENST00000516884 ASTLQ6HA08 431 aaPredicted RBP8.83□□□□□ -1
SNORA40.15-201ENST00000516884 FKBP8Q14318 412 aa8.82□□□□□ -1
SNORA40.15-201ENST00000516884 MIER1Q8N108 512 aa8.82□□□□□ -1
SNORA40.15-201ENST00000516884 RASEFQ8IZ41 740 aa8.81□□□□□ -1
SNORA40.15-201ENST00000516884 PELP1Q8IZL8 1130 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms