Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 PRDX3P3-201ENST00000447765 522 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 SDC4P-201ENST00000453285 601 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC112187.1-201ENST00000455837 479 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC005229.2-201ENST00000456995 399 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC114982.1-201ENST00000469402 321 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RPSAP50-201ENST00000481955 852 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RPL7P47-201ENST00000497299 556 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AL359273.1-201ENST00000510918 627 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RNU2-31P-201ENST00000516954 155 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 RNA5SP170-201ENST00000517150 101 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC021678.3-201ENST00000517893 476 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 MRPS18CP4-201ENST00000535821 231 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC093023.1-201ENST00000547375 507 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC009852.2-201ENST00000567898 485 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC006023.2-201ENST00000609916 167 ntBASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.12□□□□□ -1.43
CTC1Q2NKJ3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 OR4G2P-202ENST00000641004 1759 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC109446.4-201ENST00000623235 2755 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 RNY1P16-201ENST00000363063 111 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 MIR19A-201ENST00000384878 82 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AL136372.1-201ENST00000403060 228 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 PRRC2CP1-201ENST00000404428 159 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AL133173.1-201ENST00000423458 397 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 ELOCP18-201ENST00000434209 337 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC073410.1-201ENST00000435125 589 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 PSMD10P3-201ENST00000437000 448 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AL450023.1-201ENST00000450868 751 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 RNU7-167P-201ENST00000459160 62 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC140059.1-201ENST00000489238 361 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 YWHAEP4-201ENST00000505390 198 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC074133.1-201ENST00000515696 183 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 TXNP4-201ENST00000575018 310 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC023813.4-201ENST00000607580 580 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AL355816.1-201ENST00000607951 118 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 RNA5SP439-201ENST00000617595 124 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 ZNF33CP-201ENST00000432492 2030 ntBASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CTC1Q2NKJ3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 AL391516.1-201ENST00000554380 2449 ntBASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 AL159987.1-201ENST00000347911 293 ntBASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 RNU6-97P-201ENST00000363387 104 ntBASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 U3.10-201ENST00000364459 214 ntBASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 RNA5SP211-201ENST00000365516 117 ntBASIC6.1□□□□□ -1.43
CTC1Q2NKJ3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms