Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH12P55289 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CDH12P55289 FRG1BP-201ENST00000278882 761 ntBASIC3.73□□□□□ -1.81
CDH12P55289 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDH12P55289 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 MIR1251-201ENST00000408552 70 ntBASIC3.73□□□□□ -1.81
CDH12P55289 MIR548F1-201ENST00000408667 84 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 RPL26P29-201ENST00000415623 438 ntBASIC3.73□□□□□ -1.81
CDH12P55289 MTCYBP24-201ENST00000420387 1106 ntBASIC3.73□□□□□ -1.81
CDH12P55289 ISCA1P6-201ENST00000427740 390 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 AL358472.1-201ENST00000431295 329 ntBASIC3.73□□□□□ -1.81
CDH12P55289 BTF3P10-201ENST00000433415 495 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH12P55289 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 AL049734.2-201ENST00000441066 616 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 RPL29P29-201ENST00000448725 423 ntBASIC3.73□□□□□ -1.81
CDH12P55289 TPT1P13-201ENST00000449760 499 ntBASIC3.73□□□□□ -1.81
CDH12P55289 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH12P55289 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.73□□□□□ -1.81
CDH12P55289 RPL7P15-201ENST00000461190 712 ntBASIC3.73□□□□□ -1.81
CDH12P55289 HMGB1P25-201ENST00000468402 607 ntBASIC3.73□□□□□ -1.81
CDH12P55289 RN7SL459P-201ENST00000481078 302 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 AC108475.1-201ENST00000507880 950 ntBASIC3.73□□□□□ -1.81
CDH12P55289 Y_RNA.672-201ENST00000516289 104 ntBASIC3.73□□□□□ -1.81
CDH12P55289 RN7SKP244-201ENST00000516513 307 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH12P55289 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 NARSP2-201ENST00000518524 679 ntBASIC3.73□□□□□ -1.81
CDH12P55289 OR4P1P-201ENST00000530808 1136 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.73□□□□□ -1.81
CDH12P55289 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.73□□□□□ -1.81
CDH12P55289 CENPUP2-201ENST00000555897 1186 ntBASIC3.73□□□□□ -1.81
CDH12P55289 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH12P55289 AC136619.2-201ENST00000563361 631 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC022968.1-201ENST00000567372 442 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH12P55289 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH12P55289 MIR5096-201ENST00000583713 70 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AL669831.4-202ENST00000590817 238 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC068790.4-201ENST00000602474 263 ntBASIC3.73□□□□□ -1.81
CDH12P55289 OR6R2P-201ENST00000609216 300 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC114781.5-201ENST00000615297 108 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC136475.10-201ENST00000620253 385 ntBASIC3.73□□□□□ -1.81
CDH12P55289 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDH12P55289 AC068880.5-201ENST00000624331 290 ntBASIC3.73□□□□□ -1.81
CDH12P55289 AC011944.2-201ENST00000624440 683 ntBASIC3.73□□□□□ -1.81
CDH12P55289 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 SEPT14P19-203ENST00000633205 211 ntBASIC3.73□□□□□ -1.81
CDH12P55289 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH12P55289 AC010149.2-201ENST00000637608 315 ntBASIC3.73□□□□□ -1.81
CDH12P55289 OR5H6-203ENST00000642105 978 ntBASIC3.73□□□□□ -1.81
CDH12P55289 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH12P55289 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH12P55289 AC027287.1-201ENST00000553115 1453 ntBASIC3.73□□□□□ -1.81
CDH12P55289 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH12P55289 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH12P55289 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH12P55289 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH12P55289 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH12P55289 MIR585-201ENST00000384887 94 ntBASIC3.72□□□□□ -1.81
CDH12P55289 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.72□□□□□ -1.81
CDH12P55289 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH12P55289 RPL23AP26-201ENST00000412728 464 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC009480.2-201ENST00000422916 432 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC092832.1-201ENST00000422934 400 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC245028.1-201ENST00000423259 256 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 AL358934.1-201ENST00000432346 324 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 ATP5HP2-201ENST00000433885 485 ntBASIC3.72□□□□□ -1.81
CDH12P55289 CKS1BP5-201ENST00000434172 273 ntBASIC3.72□□□□□ -1.81
CDH12P55289 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH12P55289 KCTD9P3-201ENST00000434597 1169 ntBASIC3.72□□□□□ -1.81
CDH12P55289 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
CDH12P55289 MTATP6P13-201ENST00000438531 667 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH12P55289 AC108734.1-201ENST00000439549 399 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 AC079448.1-201ENST00000449377 373 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms