RNA–Protein interactions for RNA: ENST00000488999.1

AC079943.2-201, humanhuman

TSL 3 BASIC

Gene AC079943.2, Length 716 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079943.2-201ENST00000488999 AEBP2Q6ZN18 517 aaPredicted RBP25.99■■□□□ 1.75
AC079943.2-201ENST00000488999 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
AC079943.2-201ENST00000488999 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
AC079943.2-201ENST00000488999 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
AC079943.2-201ENST00000488999 FOXD1Q16676 465 aa20.77■□□□□ 0.92
AC079943.2-201ENST00000488999 MSH5O43196 834 aa19.63■□□□□ 0.73
AC079943.2-201ENST00000488999 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
AC079943.2-201ENST00000488999 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
AC079943.2-201ENST00000488999 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
AC079943.2-201ENST00000488999 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
AC079943.2-201ENST00000488999 ADRA2BP18089 450 aa19.14■□□□□ 0.65
AC079943.2-201ENST00000488999 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
AC079943.2-201ENST00000488999 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
AC079943.2-201ENST00000488999 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
AC079943.2-201ENST00000488999 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
AC079943.2-201ENST00000488999 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
AC079943.2-201ENST00000488999 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
AC079943.2-201ENST00000488999 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
AC079943.2-201ENST00000488999 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
AC079943.2-201ENST00000488999 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
AC079943.2-201ENST00000488999 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
AC079943.2-201ENST00000488999 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
AC079943.2-201ENST00000488999 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
AC079943.2-201ENST00000488999 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
AC079943.2-201ENST00000488999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.15■□□□□ 0.18
AC079943.2-201ENST00000488999 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
AC079943.2-201ENST00000488999 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
AC079943.2-201ENST00000488999 CAPN15O75808 1086 aa15.62■□□□□ 0.09
AC079943.2-201ENST00000488999 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
AC079943.2-201ENST00000488999 DSG3P32926 999 aa15.51■□□□□ 0.07
AC079943.2-201ENST00000488999 KCNA4P22459 653 aa15.48■□□□□ 0.07
AC079943.2-201ENST00000488999 APLP2Q06481 763 aa15.37■□□□□ 0.05
AC079943.2-201ENST00000488999 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
AC079943.2-201ENST00000488999 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
AC079943.2-201ENST00000488999 POTEHQ6S545 545 aa15.3■□□□□ 0.04
AC079943.2-201ENST00000488999 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
AC079943.2-201ENST00000488999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
AC079943.2-201ENST00000488999 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
AC079943.2-201ENST00000488999 ABCB7O75027 752 aa15.21■□□□□ 0.03
AC079943.2-201ENST00000488999 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
AC079943.2-201ENST00000488999 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
AC079943.2-201ENST00000488999 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
AC079943.2-201ENST00000488999 POLA2Q14181 598 aa14.78□□□□□ -0.04
AC079943.2-201ENST00000488999 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
AC079943.2-201ENST00000488999 SLC4A1APQ9BWU0 796 aaKnown RBP14.61□□□□□ -0.07
AC079943.2-201ENST00000488999 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
AC079943.2-201ENST00000488999 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
AC079943.2-201ENST00000488999 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
AC079943.2-201ENST00000488999 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
AC079943.2-201ENST00000488999 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
AC079943.2-201ENST00000488999 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
AC079943.2-201ENST00000488999 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
AC079943.2-201ENST00000488999 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
AC079943.2-201ENST00000488999 ZBTB22O15209 634 aa14.18□□□□□ -0.14
AC079943.2-201ENST00000488999 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
AC079943.2-201ENST00000488999 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
AC079943.2-201ENST00000488999 HAX1O00165 279 aa14.08□□□□□ -0.16
AC079943.2-201ENST00000488999 FBLN2P98095 1184 aa14.07□□□□□ -0.16
AC079943.2-201ENST00000488999 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
AC079943.2-201ENST00000488999 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
AC079943.2-201ENST00000488999 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
AC079943.2-201ENST00000488999 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
AC079943.2-201ENST00000488999 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
AC079943.2-201ENST00000488999 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
AC079943.2-201ENST00000488999 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
AC079943.2-201ENST00000488999 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
AC079943.2-201ENST00000488999 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
AC079943.2-201ENST00000488999 EVX2Q03828 476 aa13.75□□□□□ -0.21
AC079943.2-201ENST00000488999 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
AC079943.2-201ENST00000488999 C19orf67A6NJJ6 358 aa13.62□□□□□ -0.23
AC079943.2-201ENST00000488999 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
AC079943.2-201ENST00000488999 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
AC079943.2-201ENST00000488999 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
AC079943.2-201ENST00000488999 GABBR2O75899 941 aa13.5□□□□□ -0.25
AC079943.2-201ENST00000488999 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
AC079943.2-201ENST00000488999 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
AC079943.2-201ENST00000488999 LHX8Q68G74 356 aa13.33□□□□□ -0.28
AC079943.2-201ENST00000488999 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
AC079943.2-201ENST00000488999 CLCN6P51797 869 aa13.25□□□□□ -0.29
AC079943.2-201ENST00000488999 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
AC079943.2-201ENST00000488999 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
AC079943.2-201ENST00000488999 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
AC079943.2-201ENST00000488999 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
AC079943.2-201ENST00000488999 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
AC079943.2-201ENST00000488999 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
AC079943.2-201ENST00000488999 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
AC079943.2-201ENST00000488999 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
AC079943.2-201ENST00000488999 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
AC079943.2-201ENST00000488999 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.33
AC079943.2-201ENST00000488999 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
AC079943.2-201ENST00000488999 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
AC079943.2-201ENST00000488999 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
AC079943.2-201ENST00000488999 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
AC079943.2-201ENST00000488999 OTUD5Q96G74 571 aa12.75□□□□□ -0.37
AC079943.2-201ENST00000488999 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
AC079943.2-201ENST00000488999 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
AC079943.2-201ENST00000488999 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
AC079943.2-201ENST00000488999 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
AC079943.2-201ENST00000488999 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
AC079943.2-201ENST00000488999 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms