Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 AC018529.3-201ENST00000624212 2254 ntBASIC3.91□□□□□ -1.78
TCRBV7S3A2A0A539 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.78
TCRBV7S3A2A0A539 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TCRBV7S3A2A0A539 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.9□□□□□ -1.78
TCRBV7S3A2A0A539 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 FARSBP1-201ENST00000435808 1778 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-97P-201ENST00000363387 104 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RPL21P65-201ENST00000406094 466 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC078974.1-201ENST00000411597 223 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 C8orf59P1-201ENST00000429930 303 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC016712.1-201ENST00000431088 378 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC009961.2-201ENST00000435771 251 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RPL22P17-201ENST00000438729 315 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RABEPKP1-201ENST00000440529 1026 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RPL17P49-201ENST00000443728 411 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 GAPDHP17-201ENST00000449858 1001 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RPS20P32-201ENST00000456044 356 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC105252.1-201ENST00000503089 286 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 NDUFB4P2-201ENST00000509515 391 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 MIR2114-201ENST00000516645 80 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 SUMO2P20-201ENST00000520803 283 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AL157394.1-201ENST00000562983 1224 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC107954.1-201ENST00000565906 727 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AL591034.3-201ENST00000605511 685 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RNU4-89P-201ENST00000607443 133 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC091304.9-201ENST00000612091 226 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC009159.1-201ENST00000618386 642 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC095050.2-201ENST00000510748 1458 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AC090337.1-201ENST00000579651 2074 ntBASIC3.9□□□□□ -1.79
TCRBV7S3A2A0A539 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC009902.3-201ENST00000606235 2172 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 Y_RNA.6-201ENST00000362350 114 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 RNU5A-6P-201ENST00000384136 116 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 Y_RNA.548-201ENST00000384656 105 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 U3.20-201ENST00000390909 217 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 SOD2P1-201ENST00000396543 562 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 CKS1BP5-201ENST00000434172 273 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 MRPS18BP2-201ENST00000434310 759 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 SRRM1P2-201ENST00000464531 1192 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC091133.4-201ENST00000511142 308 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-352P-201ENST00000516908 107 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 RAB9BP1-201ENST00000519581 626 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 HMGB3P26-201ENST00000560051 582 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC034268.2-201ENST00000571784 482 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC137800.2-201ENST00000574375 120 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 MIR4284-201ENST00000578924 81 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 MIR3682-201ENST00000581338 84 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 UBE2L4-201ENST00000587688 464 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 AC011468.4-201ENST00000603942 409 ntBASIC3.89□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-87P-201ENST00000607561 108 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms