Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL031666.3-201ENST00000609320 1006 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC104260.1-201ENST00000616660 539 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL158196.1-201ENST00000616786 434 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AL158801.5-201ENST00000623123 465 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC009033.1-201ENST00000624279 431 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC009161.2-201ENST00000624626 138 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 AC099654.5-201ENST00000636479 350 ntBASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
AMBRA1Q9C0C7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC009902.3-201ENST00000606235 2172 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 SNORD74.4-201ENST00000364129 80 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RNY4P16-201ENST00000364768 94 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC019155.1-201ENST00000382242 574 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 GLULP6-201ENST00000399502 913 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 MTATP6P18-201ENST00000417994 673 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RPS15AP12-201ENST00000419498 388 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RPL7P54-201ENST00000438336 674 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 MTCO2P29-201ENST00000465212 189 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RPS29P25-201ENST00000481709 171 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 NIP7P2-201ENST00000485801 544 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 RPL36AP51-201ENST00000487216 318 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 MTCYBP18-201ENST00000501056 747 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC008628.2-201ENST00000502605 298 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AF235103.2-201ENST00000525753 346 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AP003497.1-201ENST00000528472 562 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 NRBF2P5-201ENST00000603087 788 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AL162413.1-201ENST00000603198 110 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 AC004853.1-201ENST00000604902 698 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 U3.53-201ENST00000628922 216 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 MFSD8-216ENST00000641147 4009 ntBASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
AMBRA1Q9C0C7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 NMD3P1-201ENST00000439704 1488 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 MTND4P12-201ENST00000498999 1377 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 Z98745.1-201ENST00000402553 494 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 RNA5SP39-201ENST00000411245 120 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC127526.1-201ENST00000417526 366 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC007283.2-201ENST00000424739 197 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC008065.1-201ENST00000428525 348 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC016831.4-201ENST00000438302 307 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC104308.1-201ENST00000454621 333 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 RPS20P24-201ENST00000457473 361 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AK3P4-201ENST00000504283 583 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 MTCO3P44-201ENST00000510977 541 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 AC007016.1-201ENST00000512110 244 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 RNU6-507P-201ENST00000516045 100 ntBASIC4.18□□□□□ -1.74
AMBRA1Q9C0C7 IGKV2D-36-201ENST00000518643 226 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms