Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 FOXN1-201ENST00000226247 3436 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC2.56□□□□□ -2
LCE4AQ5TA78 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 U3.3-201ENST00000362986 216 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 RN7SKP50-201ENST00000364694 315 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 SNORA12-201ENST00000391162 147 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 MIR1183-201ENST00000408856 89 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 AL590139.1-201ENST00000416267 400 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC013429.1-201ENST00000456604 422 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 RN7SL456P-201ENST00000469290 295 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 RN7SL547P-201ENST00000490793 290 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.56□□□□□ -2
LCE4AQ5TA78 RNA5SP473-201ENST00000516402 125 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC2.56□□□□□ -2
LCE4AQ5TA78 ATP5J2P6-201ENST00000565203 266 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 RN7SL32P-201ENST00000580514 281 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC2.56□□□□□ -2
LCE4AQ5TA78 COX6CP16-201ENST00000603667 216 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 MIR8053-201ENST00000613344 75 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 SH3TC2-211ENST00000512049 4002 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 ZNF619-202ENST00000429348 4104 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 BTBD18-202ENST00000436147 2947 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 UVRAG-207ENST00000531818 3152 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC007406.5-201ENST00000570140 3170 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 FAM13B-202ENST00000420893 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC104260.2-201ENST00000623551 3497 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC068254.2-201ENST00000623938 3577 ntBASIC2.56□□□□□ -2
LCE4AQ5TA78 PCDHGA11-203ENST00000622044 3633 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 GCNT1-203ENST00000444201 5476 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CD302-201ENST00000259053 3741 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 GPRASP2-201ENST00000332262 3720 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC2.56□□□□□ -2
LCE4AQ5TA78 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC2.56□□□□□ -2
LCE4AQ5TA78 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC2.55□□□□□ -2
LCE4AQ5TA78 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC2.55□□□□□ -2
LCE4AQ5TA78 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC2.55□□□□□ -2
LCE4AQ5TA78 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LCE4AQ5TA78 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC2.55□□□□□ -2
LCE4AQ5TA78 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms