Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
VPS9D1Q9Y2B5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
VPS9D1Q9Y2B5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
VPS9D1Q9Y2B5 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AL591135.1-201ENST00000401578 5914 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-288P-201ENST00000363690 104 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 LCN1P2-201ENST00000372030 223 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 Y_RNA.412-201ENST00000384001 104 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 RPL7AP14-201ENST00000424041 802 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 RPL21P40-201ENST00000428586 483 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 CFL1P1-202ENST00000432948 411 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 VPS25P1-201ENST00000455691 508 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC053481.1-201ENST00000467217 306 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 RN7SL714P-201ENST00000487050 298 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC020890.1-201ENST00000491837 504 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 SNORA25.12-201ENST00000516202 82 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-612P-201ENST00000516909 102 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 IGHV4-55-201ENST00000520889 368 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC115990.1-201ENST00000526957 301 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC009314.1-201ENST00000603871 304 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC123912.5-201ENST00000605470 343 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC005828.6-201ENST00000606610 232 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AC015819.1-201ENST00000613588 663 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 MIR7159-201ENST00000620587 66 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 SNX18P3-202ENST00000565670 1750 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 GNL2P1-201ENST00000451274 2190 ntBASIC6.33□□□□□ -1.4
VPS9D1Q9Y2B5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 Y_RNA.7-201ENST00000362352 102 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-653P-201ENST00000363074 106 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-926P-201ENST00000384075 107 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RNU6-14P-201ENST00000384630 106 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AL033519.1-201ENST00000407266 307 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 MRPS21P5-201ENST00000417885 231 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 EEF1B2P7-201ENST00000451177 676 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RN7SL393P-201ENST00000463588 296 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RN7SL643P-201ENST00000471845 291 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RN7SL836P-201ENST00000476140 296 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AC018645.1-201ENST00000505003 109 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 Y_RNA.709-201ENST00000516952 92 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AL133399.1-201ENST00000527476 298 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AK6P2-201ENST00000549020 471 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 TPRX1P1-201ENST00000557620 319 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 MAPK10-261ENST00000641050 3109 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AC135776.4-201ENST00000624300 1904 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 AP003486.1-201ENST00000525716 3994 ntBASIC6.32□□□□□ -1.4
VPS9D1Q9Y2B5 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
VPS9D1Q9Y2B5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VPS9D1Q9Y2B5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VPS9D1Q9Y2B5 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS9D1Q9Y2B5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
VPS9D1Q9Y2B5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS9D1Q9Y2B5 BIN2P1-201ENST00000504996 1530 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms