Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RMST_3.1-201ENST00000611651 109 ntBASIC3□□□□□ -1.93
LITAFQ99732 AL591926.1-201ENST00000620542 217 ntBASIC3□□□□□ -1.93
LITAFQ99732 AP002505.2-201ENST00000623585 696 ntBASIC3□□□□□ -1.93
LITAFQ99732 AC093535.2-201ENST00000624769 2326 ntBASIC3□□□□□ -1.93
LITAFQ99732 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LITAFQ99732 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3□□□□□ -1.93
LITAFQ99732 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LITAFQ99732 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LITAFQ99732 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3□□□□□ -1.93
LITAFQ99732 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LITAFQ99732 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
LITAFQ99732 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3□□□□□ -1.93
LITAFQ99732 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LITAFQ99732 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AL442639.1-201ENST00000625030 1899 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 AC131971.1-201ENST00000332881 1482 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 SNURFL-201ENST00000309296 343 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LITAFQ99732 RNU6-263P-201ENST00000363811 107 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 RNU6-278P-201ENST00000390945 109 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 RNU11-4P-201ENST00000391149 133 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
LITAFQ99732 HSPD1P16-201ENST00000402302 394 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 RPL23AP48-201ENST00000406913 488 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 OR9R1P-201ENST00000412200 877 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC092447.6-201ENST00000414578 210 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 MTCO3P12-201ENST00000416718 547 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.99□□□□□ -1.93
LITAFQ99732 OR1AA1P-201ENST00000419597 916 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC245054.1-201ENST00000420944 258 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 BRWD1P3-201ENST00000428816 390 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 RPL23AP89-201ENST00000439324 255 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AL590399.6-201ENST00000446396 307 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC114755.5-201ENST00000447760 831 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 SNRPGP6-201ENST00000451124 220 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC016724.1-201ENST00000453215 421 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 RPL32P9-201ENST00000487963 407 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC108693.1-201ENST00000496068 432 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 HMGN1P12-201ENST00000499125 195 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 MTCO2P30-201ENST00000503662 364 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC114786.4-201ENST00000508771 728 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC114797.1-201ENST00000514003 728 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 MTCO1P35-201ENST00000515270 228 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.99□□□□□ -1.93
LITAFQ99732 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC2.99□□□□□ -1.93
LITAFQ99732 CENPUP1-201ENST00000526649 1202 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC011979.2-201ENST00000527568 352 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 PDCD5P1-201ENST00000543528 309 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 CR383656.7-201ENST00000548164 174 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AL133153.1-201ENST00000557756 303 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC055876.1-202ENST00000567053 138 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 AC020914.4-201ENST00000597690 277 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC024940.5-201ENST00000622889 474 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC019278.1-201ENST00000623516 479 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC073592.6-201ENST00000624271 415 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AP000843.1-201ENST00000624880 701 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 AC138649.5-201ENST00000637456 137 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.99□□□□□ -1.93
LITAFQ99732 AL356489.2-201ENST00000566968 3528 ntBASIC2.99□□□□□ -1.93
LITAFQ99732 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LITAFQ99732 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LITAFQ99732 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LITAFQ99732 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC2.98□□□□□ -1.93
LITAFQ99732 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.98□□□□□ -1.93
LITAFQ99732 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
LITAFQ99732 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms