Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CNOT4O95628 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 Y_RNA.493-201ENST00000384422 102 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 RNU6-606P-201ENST00000384721 111 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 MIR559-201ENST00000385188 96 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 Y_RNA.579-201ENST00000390939 94 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.6□□□□□ -1.67
CNOT4O95628 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.6□□□□□ -1.67
CNOT4O95628 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.6□□□□□ -1.67
CNOT4O95628 RPL36AP36-201ENST00000418616 301 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.6□□□□□ -1.67
CNOT4O95628 AC137499.1-201ENST00000427602 88 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 RPL19P16-201ENST00000433839 588 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 MTND3P2-201ENST00000438452 342 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 GTF2IP13-201ENST00000438487 386 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC090804.1-201ENST00000448870 490 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 FGF7P3-201ENST00000454645 303 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 SNRPGP5-201ENST00000456003 220 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.6□□□□□ -1.67
CNOT4O95628 PPP1R2P5-201ENST00000457256 603 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC007547.1-201ENST00000462177 490 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 RPL23AP72-201ENST00000492447 435 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AL049874.2-201ENST00000492636 288 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC098976.1-201ENST00000513014 541 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 SCARNA24.1-201ENST00000516465 137 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 RN7SKP260-201ENST00000516907 149 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 ELOCP31-201ENST00000540463 467 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC092490.3-201ENST00000545370 572 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CNOT4O95628 AC068831.4-201ENST00000556118 109 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.6□□□□□ -1.67
CNOT4O95628 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.6□□□□□ -1.67
CNOT4O95628 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 IGHV3-29-201ENST00000604817 344 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AC106900.2-201ENST00000604994 317 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.6□□□□□ -1.67
CNOT4O95628 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 FAM25E-202ENST00000608562 189 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 AL133412.1-201ENST00000380194 2992 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CNOT4O95628 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CNOT4O95628 THAP12P4-201ENST00000528321 2266 ntBASIC4.6□□□□□ -1.67
CNOT4O95628 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CNOT4O95628 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CNOT4O95628 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
CNOT4O95628 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNOT4O95628 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNOT4O95628 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.59□□□□□ -1.67
CNOT4O95628 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNOT4O95628 RNU6-28P-201ENST00000362378 107 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 RNU6-254P-201ENST00000363377 107 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 SNORD42.2-201ENST00000365570 69 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CNOT4O95628 RNU6-43P-201ENST00000384302 107 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 MIR589-201ENST00000385238 99 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CNOT4O95628 AL049697.2-201ENST00000403708 294 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 RN7SKP126-201ENST00000411143 300 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 CHEK2P3-201ENST00000416118 248 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.59□□□□□ -1.67
CNOT4O95628 AL049745.1-201ENST00000433953 286 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.59□□□□□ -1.67
CNOT4O95628 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNOT4O95628 AC005297.2-201ENST00000450430 606 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 Y_RNA.639-201ENST00000458981 102 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 FTH1P2-201ENST00000466086 412 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 BX284632.1-201ENST00000478218 541 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.59□□□□□ -1.67
CNOT4O95628 KLHL2P1-201ENST00000508691 521 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 BTF3P13-201ENST00000513224 490 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 RN7SKP256-201ENST00000517201 314 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.59□□□□□ -1.67
CNOT4O95628 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.59□□□□□ -1.67
CNOT4O95628 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.59□□□□□ -1.67
CNOT4O95628 MTND5P33-201ENST00000571250 1450 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 MIR3146-201ENST00000580367 79 ntBASIC4.59□□□□□ -1.67
CNOT4O95628 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CNOT4O95628 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.59□□□□□ -1.67
CNOT4O95628 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms