Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC055839.1-201ENST00000634467 498 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AL133216.2-202ENST00000634512 349 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 DDX10P1-201ENST00000448545 1933 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC12P31275 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC12P31275 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
HOXC12P31275 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
HOXC12P31275 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC12P31275 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 EXOC5P1-201ENST00000510543 1969 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXC12P31275 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 API5P2-201ENST00000397055 1498 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 Y_RNA.474-201ENST00000384341 102 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 Y_RNA.576-201ENST00000384781 102 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AL109941.1-201ENST00000401925 229 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 RAB28P1-201ENST00000411517 641 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 AL137014.1-201ENST00000420490 1226 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AC007161.1-204ENST00000423039 460 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 RAC1P6-201ENST00000423911 575 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC12P31275 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 Z80107.2-201ENST00000445127 392 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 Y_RNA.632-201ENST00000459189 102 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 RPS29P22-201ENST00000472363 168 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC12P31275 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 AP001922.4-201ENST00000526967 290 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC12P31275 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXC12P31275 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXC12P31275 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 AC012669.1-201ENST00000603209 283 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AL034351.1-201ENST00000605288 668 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 PART1_1.1-201ENST00000611761 217 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AL390240.1-201ENST00000612950 384 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 SNHG22-203ENST00000617833 660 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 AC000095.2-202ENST00000637415 154 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC12P31275 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXC12P31275 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 EIF2AP4-201ENST00000424793 1781 ntBASIC4.78□□□□□ -1.64
HOXC12P31275 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HOXC12P31275 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXC12P31275 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
HOXC12P31275 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC12P31275 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 AC108751.5-201ENST00000492880 1336 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXC12P31275 RNU6-1249P-201ENST00000363237 111 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 RNU6-522P-201ENST00000364497 107 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 BX323014.1-201ENST00000412876 237 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AF228730.4-201ENST00000421457 183 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 RPL7L1P10-201ENST00000427790 463 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC016712.1-201ENST00000431088 378 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 MRPS18BP2-201ENST00000434310 759 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXC12P31275 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC236972.2-201ENST00000434979 310 ntBASIC4.77□□□□□ -1.65
HOXC12P31275 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXC12P31275 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXC12P31275 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms