Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 IGLVIV-53-201ENST00000520107 367 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AL390208.1-201ENST00000605885 644 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC073534.2-201ENST00000620377 381 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 U6.105-201ENST00000637379 88 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SMC1BQ8NDV3 AC012020.1-201ENST00000624541 1728 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 LINC01109-201ENST00000603837 3081 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC107068.1-201ENST00000563286 4218 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC011155.1-201ENST00000316512 456 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 Y_RNA.500-201ENST00000384466 111 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 SNORD115.1-201ENST00000391109 76 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC007742.1-201ENST00000425789 329 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AP000907.1-201ENST00000428428 510 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC008065.1-201ENST00000428525 348 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC236972.1-201ENST00000433225 199 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 ELOCP26-201ENST00000436067 329 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 DNAJC19P4-201ENST00000440115 345 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 SDCBPP1-201ENST00000440192 890 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 PGBD4P3-201ENST00000440731 581 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC093392.2-201ENST00000450682 337 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 HMGB1P21-201ENST00000502313 581 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 RN7SKP244-201ENST00000516513 307 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 RNU6-1178P-201ENST00000516674 107 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AP003467.2-201ENST00000520175 319 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 IGKV2D-19-201ENST00000523346 262 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 EEF1B2P4-201ENST00000551398 348 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC006960.3-201ENST00000561845 705 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC025588.3-201ENST00000604182 274 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC007684.1-201ENST00000609671 477 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC138649.3-201ENST00000622154 254 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 CCT4P2-201ENST00000233836 1548 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AL049780.3-201ENST00000624612 1583 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 AC092447.10-201ENST00000620607 1652 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 FARSBP1-201ENST00000435808 1778 ntBASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
SMC1BQ8NDV3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 RNA5SP175-201ENST00000364275 119 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 RNU6-853P-201ENST00000364306 107 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 RNVU1-3-201ENST00000364313 161 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 RNU6-343P-201ENST00000364709 104 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 FCF1P10-201ENST00000407590 479 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 RN7SKP156-201ENST00000410308 342 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 RNU4-6P-201ENST00000410804 122 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 AC096664.2-201ENST00000411843 406 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 MTCO1P12-201ENST00000414273 1543 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 SPA17P1-201ENST00000416656 452 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 KPNA2P2-201ENST00000419546 1489 ntBASIC5.1□□□□□ -1.59
SMC1BQ8NDV3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms