Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CAPN3P20807 AC090888.2-201ENST00000559765 1144 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.96□□□□□ -1.78
CAPN3P20807 AP001429.1-201ENST00000602568 530 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AC128687.2-201ENST00000609657 566 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AC021755.4-201ENST00000616620 456 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AC009268.2-201ENST00000621925 457 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AL359715.5-201ENST00000623431 443 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AC112484.5-201ENST00000624189 228 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AP005264.7-201ENST00000625003 745 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.96□□□□□ -1.78
CAPN3P20807 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CAPN3P20807 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CAPN3P20807 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.96□□□□□ -1.78
CAPN3P20807 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CAPN3P20807 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CAPN3P20807 AC091152.2-201ENST00000591628 2569 ntBASIC3.96□□□□□ -1.78
CAPN3P20807 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 RPL21P132-201ENST00000331267 462 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 RNU1-14P-201ENST00000362759 152 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 RNU6-723P-201ENST00000383973 107 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 RPS3AP24-201ENST00000407896 734 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 RN7SKP159-201ENST00000410657 292 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 TPMTP3-201ENST00000411928 735 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 HMGB3P23-201ENST00000414981 585 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AC007390.1-201ENST00000415722 356 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AC010099.3-201ENST00000423896 409 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 HMGB3P5-201ENST00000428894 612 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 AC007389.2-201ENST00000434630 306 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 RPS3AP54-201ENST00000435535 734 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 UBE2FP3-201ENST00000436366 524 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 RPL7P28-201ENST00000437739 740 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AF228730.2-201ENST00000438784 848 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 SSXP4-201ENST00000451349 245 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC091564.1-201ENST00000464563 479 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 AL592156.1-201ENST00000508758 304 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CAPN3P20807 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.95□□□□□ -1.78
CAPN3P20807 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.95□□□□□ -1.78
CAPN3P20807 COX6CP3-201ENST00000580869 223 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AC104662.1-201ENST00000604448 511 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC009464.1-201ENST00000615731 469 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 AC002076.2-201ENST00000617362 122 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
CAPN3P20807 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CAPN3P20807 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.95□□□□□ -1.78
CAPN3P20807 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CAPN3P20807 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.95□□□□□ -1.78
CAPN3P20807 AC138915.3-201ENST00000562908 1389 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CAPN3P20807 MIR383-201ENST00000362257 73 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 SNORD46.1-201ENST00000364139 104 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 RNA5SP88-201ENST00000365560 109 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 SNORA11.2-201ENST00000408318 127 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 PIGPP2-201ENST00000411569 458 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.94□□□□□ -1.78
CAPN3P20807 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CAPN3P20807 MTATP6P4-201ENST00000427725 675 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.94□□□□□ -1.78
CAPN3P20807 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.94□□□□□ -1.78
CAPN3P20807 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CAPN3P20807 MTCO1P27-201ENST00000448269 226 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 AC104978.1-201ENST00000449387 391 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 VN1R40P-201ENST00000455196 941 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 RN7SL542P-201ENST00000467147 294 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
CAPN3P20807 AC069499.1-201ENST00000489433 509 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 AL132838.2-201ENST00000492041 314 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 RN7SL691P-201ENST00000494487 301 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.94□□□□□ -1.78
CAPN3P20807 AC022447.3-201ENST00000506865 495 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 POU5F1P7-201ENST00000508759 541 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.94□□□□□ -1.78
CAPN3P20807 ERHP1-201ENST00000523006 310 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.94□□□□□ -1.78
CAPN3P20807 AC006116.5-201ENST00000591936 559 ntBASIC3.94□□□□□ -1.78
CAPN3P20807 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.94□□□□□ -1.78
CAPN3P20807 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.94□□□□□ -1.78
CAPN3P20807 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms