Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM13O60858 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 RNA5SP183-201ENST00000362452 119 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RNU6-251P-201ENST00000363235 104 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RNU4-1-201ENST00000363925 141 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 Y_RNA.307-201ENST00000365022 117 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RNU6-996P-201ENST00000365438 107 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RNU6-730P-201ENST00000383954 104 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 MRPL42P3-201ENST00000401492 326 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RNU4-26P-201ENST00000410270 107 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AP000534.2-201ENST00000412729 568 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC008267.5-201ENST00000424928 265 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM13O60858 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM13O60858 RPL23AP30-201ENST00000432419 501 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM13O60858 GPR143P-201ENST00000434155 205 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM13O60858 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM13O60858 H2AFZP6-201ENST00000444403 394 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AL589765.3-201ENST00000446084 462 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 KNOP1P3-201ENST00000446933 426 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 IGHV5-78-201ENST00000450948 295 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM13O60858 RPS15AP1-201ENST00000457423 391 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RPL7P15-201ENST00000461190 712 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 APOOP2-201ENST00000461561 539 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC090142.1-201ENST00000465776 462 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC009127.1-201ENST00000467090 155 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RPS21P4-201ENST00000487122 248 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RPL32P9-201ENST00000487963 407 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RPS4XP18-201ENST00000495480 763 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RNU6-202P-201ENST00000515998 96 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC009812.2-201ENST00000517657 457 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC090572.1-201ENST00000519251 160 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 OR4R1P-201ENST00000529879 463 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM13O60858 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM13O60858 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM13O60858 UBE2L4-201ENST00000587688 464 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 SNORD91B-202ENST00000608459 222 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 AC004696.1-201ENST00000614345 607 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM13O60858 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 ASNSP3-201ENST00000451989 1306 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM13O60858 MTND5P10-201ENST00000603719 1809 ntBASIC4.85□□□□□ -1.63
TRIM13O60858 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM13O60858 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM13O60858 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM13O60858 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM13O60858 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 AL672167.1-205ENST00000641112 3080 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 AC139713.2-215ENST00000641428 5037 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM13O60858 AC011493.1-201ENST00000596753 1632 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 AC109780.1-201ENST00000451768 1344 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 RNU6-1062P-201ENST00000383908 107 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RNU6-1032P-201ENST00000384100 107 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 Y_RNA.574-201ENST00000384766 95 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM13O60858 MIR548K-201ENST00000408406 116 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM13O60858 RPS3AP54-201ENST00000435535 734 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 AL035666.1-201ENST00000446195 348 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RPL23AP15-201ENST00000450202 459 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM13O60858 AL354710.1-201ENST00000453641 246 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 HMGN3P1-201ENST00000453847 193 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 ELOCP24-201ENST00000456370 334 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RNU7-136P-201ENST00000458819 69 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RN7SL741P-201ENST00000482473 289 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 PPIAP19-201ENST00000486414 492 ntBASIC4.84□□□□□ -1.63
TRIM13O60858 RN7SL346P-201ENST00000491561 294 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms