Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TAF9BP1-201ENST00000396646 746 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 RPL32P35-201ENST00000415214 394 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 RPS15AP6-201ENST00000420703 385 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 MTND2P39-201ENST00000457230 764 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 RPS27AP1-201ENST00000475545 471 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC012181.1-201ENST00000479895 423 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 BOLA3P3-201ENST00000505182 232 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 TXNP6-201ENST00000510190 310 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC010265.1-201ENST00000513509 211 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AP003355.1-201ENST00000518956 587 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AP000790.1-201ENST00000528891 737 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AP003973.1-201ENST00000604639 691 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC100793.4-201ENST00000613683 429 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AL442067.2-201ENST00000614033 363 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC138932.5-201ENST00000617759 563 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC009318.4-201ENST00000620496 486 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.56□□□□□ -1.84
CCSER1Q9C0I3 AC002546.1-201ENST00000588041 2504 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AL136520.1-201ENST00000600311 1322 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 U3.6-201ENST00000363622 211 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AL035405.1-201ENST00000400795 710 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 RPL7P27-201ENST00000403775 720 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 RNU4-47P-201ENST00000410876 114 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AL035410.1-201ENST00000427409 427 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 FO393414.1-201ENST00000428697 1184 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC005345.1-201ENST00000431868 217 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 SDR42E1P3-201ENST00000438345 502 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 NECAP1P2-201ENST00000455668 727 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 RPS20P24-201ENST00000457473 361 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 snoU13.4-201ENST00000458916 104 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC109925.1-201ENST00000478069 331 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 MTND3P3-201ENST00000505004 126 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 PHBP14-201ENST00000512887 367 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC099778.2-201ENST00000610904 211 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC026634.1-201ENST00000634369 198 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC139713.2-210ENST00000641741 992 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 AC244517.1-201ENST00000606030 2086 ntBASIC3.55□□□□□ -1.84
CCSER1Q9C0I3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 OR1S2-201ENST00000302592 978 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 RNU6-236P-201ENST00000363886 106 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 SNORA7.4-201ENST00000384249 137 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AL024474.1-201ENST00000404655 591 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 SNORA11.1-201ENST00000408133 129 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 RNU4-65P-201ENST00000410473 140 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 OR2AS1P-201ENST00000427827 319 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 HMGB1P15-201ENST00000453854 435 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 RPL21P18-201ENST00000469899 480 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 RNU6-885P-201ENST00000516607 104 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AC068657.1-201ENST00000520807 306 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AP003102.1-201ENST00000525638 661 ntBASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.54□□□□□ -1.84
CCSER1Q9C0I3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms